| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3417 |
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| Symbol | |
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| ID | 5540916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 4447620 |
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| End bp | 4451195 |
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| Gene Length | 3576 bp |
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| Protein Length | 1191 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640895535 |
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| Product | peptidase S8/S53 subtilisin kexin sedolisin |
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| Protein accession | YP_001433485 |
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| Protein GI | 156743356 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1404] Subtilisin-like serine proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACGGC TGACACTGCT GGCTGCCGTT TTCGGTATTG CCCTGTCTGC AATGCTTCTT
CCTTCCGCGT CCCATGCGTA TGAAACAGGG GAAGAACCTT TTACCATCGG TCTCTCTAGC
GCTATGCCGC CACCGGGCTA CACGAACCGC CGTCAGCCTC TCACCGTGAT GCTCGCGCTC
GGCGACACCA ACGCATCACC ATCTGCCGAA GGCATGCTCG CGCCTCAAAC CGTCGGCGCC
GACATCCCAA CGCTCCGGCA TCTTCTGGCG GCAGCGAACA TTCCTGTTCT GTTCGAGGTG
CATACTGCAT ATAACGGCAT TGCCGTTGCA GTCACGCCGG ATCAACTGAG CGCGCTCCGC
AGTCTGCCAG GCGTGGCGAA CATCCACATC ATCACACCGA AGGAACGTTC GGCTGACCGC
GCGCTCACAT TTATCGGCGC GCCACAGTTC TGGAGCGCGA CCGGTCAACT GATCGGCAAT
GGCGTGCGCA TTGGCATTAT CGACAGCGGC ATCGACTACA CACATGCCAC ATTTGGGGGA
CCCGGCACAT CGACGGCGTT CCATTCCAAC AATCCGACCA TCATTGAACC CGGCACGTTT
CCGACCGAAA AAGTTATCGC AGGGTACGAT TTTGTCGGCG ACGCGTATGA TGCGTCAGGG
CAATTTGGGT CGCCCCTTCC CTTTCCCGAT CCCGATCCGC TCGACTGCGC CGGAGACGGC
GCCGATGCTG CGCGGCGCAT CAGCGGCGGT CATGGCACGC ATGTGGCCGG GATTGCTGCC
GGTTATGGCG TCGATGCCGC CGGTCGCACC TATCGCGGTA TCTATTCGGC AAGCGTTCCA
TTCAACGATT TTCTCGTTTT GCCCGGCGTT GCCCCCGGCG CCACGCTCGT CGCCTTGAAA
ATCTTCGGTT GCCGTGGCAC AACCACGTTT CTTACCCGCG CTATCGACTA TGCGATTGAT
CCGAATGGCG ATGGCAACAC GGATGATCGC CTGGTCGATG TGTTGAATAT TTCACTGGGT
TCGCCGTTCG GCGGCGAGAC CGACCCGGAC GTTGTCGCGA TCAATCGGGC AGTGGAAGCC
GGAGTTGTGG TCGTGGTCGC TGCCGGCGAT ACCGGCAACA CGTTTTACAG TGTCAATTCG
CCCGCCTCCG CCGGTCGGGC CATCACCGTC GGCGCTTCGG TCGATACCGG GCGCGACCCG
TCACTGCCGC CCGACAGTCT CGATCTGCTG ACATCGCGCG GTCCACAGCG CGCCAGAATA
CTCAAACCCG ACCTGGTTGC GCCAGGATTG GCAATCCGCT CTGCTGCCGC GGGATCGGGG
ATAGGCGCGC AGGCGCTCAG CGGAACATCG ATAGCTGCAC CGCACGTCGC AGGCACAGCA
GCCCTTCTGC GCCAACTGCA TCCGGCGTGG ACGCCTGAGC AAATCAAGAC GGCGCTGATG
AATGCGGCGC GCCCCGCGCG CGATGCATCC GGCAACCTGT ATCCGCCATC GCTCGCCGGC
GCCGGCAGGC TCGATGTATC GACGTTGTTC GCCTATGATG TGCTGGCGTT CGATGCCGAG
AGTCCTTCAT CCGTTGCGTT GTCCTTTGGA GCGCCATGGA TCAATCGGAC ACAACAGTTC
CAGAAGACGC TGCGGATCAC AAACAGCGGT AGTCATACAC GCACCTTGCG TCTCGCTCCG
GTGATCGCGG CTGCGGAGCA AGGGGTGCTG ATCGAAACGC CGTCCGGTCC GTATGAGGCG
CCACCGGGGC ATACTCTGGA GGTGCCGGTT ACCATTTCCG TCGATCCGGC TGCGCTCGAC
TTTACTCGCG ACGAGACGAC GCCGCAGCGA CAGATCGGCG ATCCACCGGT TTTCGAGCGG
TACTATATGG CGGAGCATAG CGGCGTCATC GAGATTCGCA GTACGCTCGG CGCGCGCATC
CGTTCAGCGC ATGCCGGCGA CTTCGATGGT GTCACGGTTT ATGTCGATGA CCAACCGCTC
GAATCATCGA TCAGTCCTGG ACGGGTTGGC AGATACCGCG CGTTCAGTCC AGGGCGCAAA
CTGGTGCGGG CGTTTCAGCC AGGAGCGCCG CTCACATCTC CGCCGCTGGT CGCCGGGGAG
TTCGATGTGG TTGATGGGCG CGATTATACG ATTGTCGTAT ACGGCTCGTG GCGCAATCCG
CGACTGGCGC TGGTCGACAA CGTTCCCGAT CCTTCTGTGT CGCGTGATGC GGTGATGCTG
CACGTTTTCA ACGGCAATCC GCTGCGCGAC GGTTCAGCCG TTGATGTCTA TCTCGACGGT
GCGCTGCTGG TTGGCAATCT GCCGGTCGGC TCAGTCAGCG CGTTCAGCGT GACGAGTCCT
GGCAACCACA AAGTGCGCTT CCTCCGCGCC GGCAGTTCGC CTGCCACGTC GTCATCGGCA
GCCAGCAAAG AGTTCGTTGC CGGCTCTGGC GAAGTGATCC TGGTGATCGG CGGCGGCAAT
GCTTCCTGGA GTCTTCGTGG CTTCACCGGT CGCGGACGGT TGATCAACGA ACAGACGACA
CGAGTCCCTT TTCAGATCGT TCCGAAATCC GCTTCGGATC TCGCGGCGAC CCAATCTGAG
GTGACGATTC CGACCGATGC CGCCACCTTT AGCATTCCGC TACGCAATGG TGGCGCGCGC
AATCAAGCGG TATCGCCGCG CGGCGCGCAG ACGCCATTGG TGAGCGCCTA CGAACTCGCG
CCTGAAGGTC GCAGTCCGCA GATCACCGGA TTGGCGCCAA ACCTGCGCCC TGCCGATATT
CGCTACGTCG GTGTGACCGG CAGTTACCTG GCGCGCGGCT GGGAAGGCAA CAATACGGTT
ATTTTCTTTG GGCTGGCGGG ATATGGCGCC TGGGCAACGC CGAATGAGGT GCAGTATCGC
GTCTACATCA GTACAACCGG TCCCGATGGA TCAGGACCGC CGGATGACAT CCCTGAATTT
GTGCTGGTCA ATACAAGTCT TGGCGCTATA CTCCCGGTGA GTGGGACGAG TGGATTCACC
CGCCCCAACG ATGTGTTCCG CGCTATTCTG TATCAGATTC AGCCAGATGG CACGCTGACC
GTATTGCGCC TGACTGACTG GAACTTTATC CCTCCGCCTT CGCTCGCACC ATTCCTCGAC
AGCGCACCAT TCGATACATC AGTGATGGCA TTGGCGACAA CCGCAGGATT CCTCGGTCTC
TCCCCTGCGA CACCGGTGTT CAAGTATTAT GTCGAAACAT ATGCGCGTGA CGCGGGCGAA
TTTACCGAGC GAATCGACCG CGTGCCCGCC AGCGGCGCTA TTACCTACGA TCTCCGCTCG
CCGGCGGCCG CGCCGCTCAA CACGCTTCCT GATGCGGGCG TCGTTCGCGC CGGATTGCCG
ACCCCCTTCT TCTTCGGCAT CGACGGCGCG CAGATTACCG GCGTTGTCAA TCAGGATGCG
CTGGCGTCGC GCCGCACGCA GGATGTGCTG CTGCTCTATC ACCACAATCC GGCGGACGCT
CAGACTGAGG TGATCACCTT GCACAGCACC CGCCTGGCAA GCACTGCGCC GCCTGAACCA
TATCGGATCT TTTTGCCGAT CGTCACAACG CCGTGA
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| Protein sequence | MQRLTLLAAV FGIALSAMLL PSASHAYETG EEPFTIGLSS AMPPPGYTNR RQPLTVMLAL
GDTNASPSAE GMLAPQTVGA DIPTLRHLLA AANIPVLFEV HTAYNGIAVA VTPDQLSALR
SLPGVANIHI ITPKERSADR ALTFIGAPQF WSATGQLIGN GVRIGIIDSG IDYTHATFGG
PGTSTAFHSN NPTIIEPGTF PTEKVIAGYD FVGDAYDASG QFGSPLPFPD PDPLDCAGDG
ADAARRISGG HGTHVAGIAA GYGVDAAGRT YRGIYSASVP FNDFLVLPGV APGATLVALK
IFGCRGTTTF LTRAIDYAID PNGDGNTDDR LVDVLNISLG SPFGGETDPD VVAINRAVEA
GVVVVVAAGD TGNTFYSVNS PASAGRAITV GASVDTGRDP SLPPDSLDLL TSRGPQRARI
LKPDLVAPGL AIRSAAAGSG IGAQALSGTS IAAPHVAGTA ALLRQLHPAW TPEQIKTALM
NAARPARDAS GNLYPPSLAG AGRLDVSTLF AYDVLAFDAE SPSSVALSFG APWINRTQQF
QKTLRITNSG SHTRTLRLAP VIAAAEQGVL IETPSGPYEA PPGHTLEVPV TISVDPAALD
FTRDETTPQR QIGDPPVFER YYMAEHSGVI EIRSTLGARI RSAHAGDFDG VTVYVDDQPL
ESSISPGRVG RYRAFSPGRK LVRAFQPGAP LTSPPLVAGE FDVVDGRDYT IVVYGSWRNP
RLALVDNVPD PSVSRDAVML HVFNGNPLRD GSAVDVYLDG ALLVGNLPVG SVSAFSVTSP
GNHKVRFLRA GSSPATSSSA ASKEFVAGSG EVILVIGGGN ASWSLRGFTG RGRLINEQTT
RVPFQIVPKS ASDLAATQSE VTIPTDAATF SIPLRNGGAR NQAVSPRGAQ TPLVSAYELA
PEGRSPQITG LAPNLRPADI RYVGVTGSYL ARGWEGNNTV IFFGLAGYGA WATPNEVQYR
VYISTTGPDG SGPPDDIPEF VLVNTSLGAI LPVSGTSGFT RPNDVFRAIL YQIQPDGTLT
VLRLTDWNFI PPPSLAPFLD SAPFDTSVMA LATTAGFLGL SPATPVFKYY VETYARDAGE
FTERIDRVPA SGAITYDLRS PAAAPLNTLP DAGVVRAGLP TPFFFGIDGA QITGVVNQDA
LASRRTQDVL LLYHHNPADA QTEVITLHST RLASTAPPEP YRIFLPIVTT P
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