Gene Rcas_3406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3406 
Symbol 
ID5540905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4436855 
End bp4437634 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content60% 
IMG OID640895524 
Productenoyl-(acyl-carrier-protein)-like protein 
Protein accessionYP_001433474 
Protein GI156743345 
COG category[I] Lipid transport and metabolism 
COG ID[COG0623] Enoyl-[acyl-carrier-protein] reductase (NADH) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCCTGC TGCAAGGCAA AAAGGGACTG GTGATGGGTG TCGCCAATGA TCATTCCATC 
GCCTGGGGAA TCGCAAAGGC GCTCCACGCA CAGGGCGCCG ATCTTGGTTT TACTTACGTC
GGCGAAGCGC TCGAACGACG GGTGCGTCCA CTTGCCGAAA GCCTCGGCGC ACGCCTGATC
GAACCGTGCG ATGTGCAGCG CGACGACGAC ATCGACGCGC TTATGGCGCG CGTGCGCGAG
GTCTACGGCG CGCTCGACAT TATTATCCAC GCTATTGCGT TCGCCAACCG CGACGAACTG
AACGGACCCT ACCTGAAAAC GACACGTGAA GGGTTTCGTT TGGCGCTCGA CGTAAGTGCG
TATTCACTGA CGGCAGTTGT CAAAGCCGCT CACGATCTGC TCGCCCCCGG CGCATCGATT
GTGACGCTGA CCTATCACGG GTCGCAGCAG GTAGCGCAGA ACTACAATGT CATGGGTGTG
GCTAAGGCGG CGCTGGAGGC AAGTGTGCGC TACCTGGCAA ACGACCTGGG TCCGCGCGGC
ATTCGGGTGA ATGCGATCAG CGCCGGTCCT ATCCGAACCC TGGCAGCCAG CGGCATTGCC
GGGTTCCGCA CGCTGCACAA ACAGTTCGCC GAAGTTGCGC CGCTACGGCG GAACGTCACG
ATTGAAGATG TTGGGAATGC CGCCGTCTGG CTGTGCAGCG ACTGGTCATC GGCGGTGACC
GGTGAAATCA TCTATGTTGA CGCGGGATTC CACACCATCT CGATCAGTTT GCCGGAGTGA
 
Protein sequence
MVLLQGKKGL VMGVANDHSI AWGIAKALHA QGADLGFTYV GEALERRVRP LAESLGARLI 
EPCDVQRDDD IDALMARVRE VYGALDIIIH AIAFANRDEL NGPYLKTTRE GFRLALDVSA
YSLTAVVKAA HDLLAPGASI VTLTYHGSQQ VAQNYNVMGV AKAALEASVR YLANDLGPRG
IRVNAISAGP IRTLAASGIA GFRTLHKQFA EVAPLRRNVT IEDVGNAAVW LCSDWSSAVT
GEIIYVDAGF HTISISLPE