| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3391 |
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| Symbol | |
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| ID | 5540890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4421168 |
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| End bp | 4422523 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640895509 |
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| Product | NADH-quinone oxidoreductase, F subunit |
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| Protein accession | YP_001433459 |
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| Protein GI | 156743330 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit |
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| TIGRFAM ID | [TIGR01959] NADH-quinone oxidoreductase, F subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCATA TCAGGCGCAT GCCGGTGTCA GCGCTGGAAA GCGAGTTTCT GCCTATGTCT
CCGCTTGCCG AGCATATCGT TCTCCGCGAT CTGGACATCG AAAACATCGC TGATTTCGAC
GTCTATCTTC AGCATGGCGG TTATGAGGCA TTGCGCATCG CAGTGACCGA ACGCACTCCG
GCTGATATTG TGCAGACGGT GAAGGACTCT GGGTTGCGCG GGCGTGGCGG CGCCGGGTTT
CCTACCGGCG TGAAGTGGGG GTTTCTGCCC AAAGGGGTCT ATCCGCGCTA CCTGCTCTGC
AACTGTGATG AGAGCGAACC TGGCACCTTC AACAATCATC AGATTATCGA CCGCAACCCG
CATCAGTTAA TCGAGGGCAT TGCGATTTCC GCCTACGCCA TCGAAGCCAA TCTTGCGTAT
ATCTATATTC GCGGTGAGTT CGCCGCGGCT GCGCGTCGTC TCGAACGCGC TATTGCGCAG
GCGTATGCAC GTGGTTTCCT GGGCAGGAAT ATCTTTGGCA CGGGGTACGA CCTTGACATT
TATGTGCATC GTGGCGCAGG GGCGTACATC TGCGGCGAAG AAACAGCACT CATGGAGTCG
CTCGAAGGGA AGATCGGTCA ACCCCGCTTG CGCCCTCCCT TTCCGGCGGT CGCCGGTCTG
TACGGTAAGC CAACGATTAT CAATAACGTC GAGACGCTGA CGAATGTGCC GATGATCGTG
CGTCACGGCG CCGTCTGGTA TCGTCAGTTC GGCACGGAGA AAAGTCCGGG CACGAAGGTG
TTCTCCGTCT CCGGTCACGT GAAGCGCCCC GGCAACTATG AAGCGCCGTT CGGCACACCC
TTGCGCGAAT TGATCTTTTC TCCCGAGTAC TGCCAGGGCA TGCGCGGCAA CCATAATGTC
AAGATTGTCG TGCCTGGCGG CGCCTCAGCC GGCTGGCTCA CCGCCGATGA TCTCGATGTG
ACGATGGACT ACGAGGCGCT GGCGGCGAAG GGGAGCATGC TCGGTTCCGG CGGCGTGATT
GTGCTCGATG AACGCGTTAA CGCTGTCGAG GTGGCGTATA AGATGGACGA GTTCTTCAAG
CACGAATCGT GCGGAAAGTG TACGCCGTGC CGTGAAGGGA CGTATTTTCT GGTCAAGGTG
CTGCACCGCA TCACGCATGG TCACGGTCGC CAGGATGATA TTCCGCTCCT GCACGATGTG
TACAATCAAA TGGCGGGCAA TTGCTTCTGC CTTCTGGGGG AGAGCGCCGT CGTGCCGATC
CGCAGTGCGC TGCGTCTTTT CCCGCACGAG TTCGAGCGGG CGATCGCGCA GGCAGGCAAT
GGACGCCACG ACATCATCAC GCTGTCGGTT CACTGA
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| Protein sequence | MRHIRRMPVS ALESEFLPMS PLAEHIVLRD LDIENIADFD VYLQHGGYEA LRIAVTERTP
ADIVQTVKDS GLRGRGGAGF PTGVKWGFLP KGVYPRYLLC NCDESEPGTF NNHQIIDRNP
HQLIEGIAIS AYAIEANLAY IYIRGEFAAA ARRLERAIAQ AYARGFLGRN IFGTGYDLDI
YVHRGAGAYI CGEETALMES LEGKIGQPRL RPPFPAVAGL YGKPTIINNV ETLTNVPMIV
RHGAVWYRQF GTEKSPGTKV FSVSGHVKRP GNYEAPFGTP LRELIFSPEY CQGMRGNHNV
KIVVPGGASA GWLTADDLDV TMDYEALAAK GSMLGSGGVI VLDERVNAVE VAYKMDEFFK
HESCGKCTPC REGTYFLVKV LHRITHGHGR QDDIPLLHDV YNQMAGNCFC LLGESAVVPI
RSALRLFPHE FERAIAQAGN GRHDIITLSV H
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