Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3374 |
Symbol | |
ID | 5540873 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 4402887 |
End bp | 4403666 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640895492 |
Product | hypothetical protein |
Protein accession | YP_001433442 |
Protein GI | 156743313 |
COG category | [S] Function unknown |
COG ID | [COG4636] Uncharacterized protein conserved in cyanobacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCGA CAACGATGGA GCAGACGCGC GCCATCGTGT ATCCTGAAAG CGATGGTCAG CCGATGGCCG ACAATACGCT CCAGTTTCGC TGGATTGTCA TGCTCCAGGG CAACCTGGCG GCGCTGTTCG CCGACCGTCC CGATGTCTTC GTGGCTGGCG ATCTCCTCTG GTACCCCGTC GAAGGGCGGC CCGACATCCG CCGCGCTCCC GACGTGCTGG TCGCCATCGG ACGCCCCAAG GGCGACCGCG GCGCCTATTT GCAGTGGGAA GAGGGGAATC AGCCGCCCCA GGCGGTGTTC GAGGTCCTCT CGCCCGGCAA TACGCTGCGC GAAATGGCGC GCAAGTTCGA GTTCTACAAC CGCTACGGCG TGCAGGAGTA TTACCTGATC GACCCCGAAC GCGGCGATGT GAGCGGCTGG GTGCGGCAGG ACGGCGTCTT GACGGTCATC GACGACATCG ACGGCTGGGT CAGCCCGCTG CTGGGGGTGC GCTTCGCCGT GCGGGATGGC GCCATCCGGT TGTTCTACCC GGACGGACGA CCGTTTCTGA CTTTTGAGGA ACTGGCGCAG GCGCGCGCCG CCGCCGAGGA GCGTGCGCAC CAGGAAGCCG AGGCGCGCGC AGCCGAAGCG CGCGCGCGAG CAGAAGCGGA AGCGCGTGCG CGCGCCGCCG AGGAACGCGC GCAACGGGAA GCCAAGGCGC GCGCCGCCGC TGAGGAGCGC GCCGCACGGC TGGCGGAGCG GCTGCGCGCG CTCGGAATTG ACCCGAACGG TGCGGCTTAG
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Protein sequence | MSATTMEQTR AIVYPESDGQ PMADNTLQFR WIVMLQGNLA ALFADRPDVF VAGDLLWYPV EGRPDIRRAP DVLVAIGRPK GDRGAYLQWE EGNQPPQAVF EVLSPGNTLR EMARKFEFYN RYGVQEYYLI DPERGDVSGW VRQDGVLTVI DDIDGWVSPL LGVRFAVRDG AIRLFYPDGR PFLTFEELAQ ARAAAEERAH QEAEARAAEA RARAEAEARA RAAEERAQRE AKARAAAEER AARLAERLRA LGIDPNGAA
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