| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3359 |
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| Symbol | |
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| ID | 5540858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4387729 |
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| End bp | 4388889 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640895477 |
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| Product | carbamoyl-phosphate synthase, small subunit |
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| Protein accession | YP_001433427 |
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| Protein GI | 156743298 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
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| TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.663891 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACAC GAACATACGC AATGCTGGCG CTGGAGGACG GTACGATCTG GCATGGATAT
GCGCTGGGGG CGATTGGCGA GCGCACCGGT GAGGTCGTGT TCAACACCTC GATGACCGGC
TACCAGGAAG TGTTGACCGA TCCATCCTAT TATGGCCAGA TTGTGGTGAT GACGGCGCCG
CACATCGGCA ACACCGGCGT TAACCGCGAA GATGAAGAAA GCCGTCATCC CTGGGTCGCC
GGTTTTGTGG TGCGCGCCGC AAGTCCGTAT GTCTCCAACT GGCGCGCTGC GCAGTCGCTC
CATGAGTACC TGGCGGAACA CGGTATCGTG GCAATGACCG GAGTCGATAC CCGCGCGCTG
GTGCGCCATA TTCGCACGCA AGGCGCAATG CGCGCCGTCA TCTCGTCGGA GAACCCGGAG
CCGGATCGCC TGATCGCCGC TGCGCGCGCC GCGCCGTCGA TGAATGGGCT TGACCTGGTG
CCGTATGTGA CCTGCGCTGA GCCGTACCAC TGGGTCGAGG GCAATCCAGG CGAGTGGGGA
CCGGGCGAAA CGCCAGCACA ACGTGGTGAA TCGACATTTC ACGTGGTCGC CTACGACTTT
GGGATCAAGC GCAATATTCT GCGGTTGCTG GCAGAGCACG GTTGTCGCGT GACGGTCGTG
CCCGCCACCA TGCCGGCTGC CGACGTCCTG GCGCTCGAAC CCGATGGTGT GTTTCTCTCG
AATGGACCGG GCGATCCGGC GGCGGTGACG TATGGCGTCC AGGCAGTGCG CGATCTGCTG
GGCAAAACTC CTGTGTTCGG CATCTGCCTG GGGCATCAGA TTCTTGGTCT GGCGCTCGGC
GGCACGACCT ATAAGTTGCA CTTCGGTCAT CGTGGCGGCA ACCAACCGGT GCGTTTCAGC
GATACTATGC GGGTGGAGAT TTCCAGCCAT AACCACGGCT TTGCGGTCGA TGCGTCGTCG
TTGCCGGAGG GAGTTGAGAT TACGCACATC AACCTGAACG ATGGGTGCGT CGAAGGGTTA
CGCGCGCCGG ATCAACGCGC TTTCAGCGTG CAGTATCATC CCGAAGCCGC GCCGGGACCG
CACGATGCGC GCTATCTGTT TCGCCGGTTT GTCGAACTGA TGGAGCAGGC GCGAAACCAG
CGTTCAATGT CGAGCGGTTG A
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| Protein sequence | MTTRTYAMLA LEDGTIWHGY ALGAIGERTG EVVFNTSMTG YQEVLTDPSY YGQIVVMTAP
HIGNTGVNRE DEESRHPWVA GFVVRAASPY VSNWRAAQSL HEYLAEHGIV AMTGVDTRAL
VRHIRTQGAM RAVISSENPE PDRLIAAARA APSMNGLDLV PYVTCAEPYH WVEGNPGEWG
PGETPAQRGE STFHVVAYDF GIKRNILRLL AEHGCRVTVV PATMPAADVL ALEPDGVFLS
NGPGDPAAVT YGVQAVRDLL GKTPVFGICL GHQILGLALG GTTYKLHFGH RGGNQPVRFS
DTMRVEISSH NHGFAVDASS LPEGVEITHI NLNDGCVEGL RAPDQRAFSV QYHPEAAPGP
HDARYLFRRF VELMEQARNQ RSMSSG
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