Gene Rcas_3340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3340 
Symbol 
ID5540838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4358681 
End bp4360153 
Gene Length1473 bp 
Protein Length490 aa 
Translation table11 
GC content62% 
IMG OID640895457 
Productserine/threonine protein kinase 
Protein accessionYP_001433408 
Protein GI156743279 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATG TCCAGCAGAT TCTCTGCCCC AAATGCCACA AGCCGAATCT CCGGCGCGCA 
CGGTTCTGCC AGCATTGCGG GCACGACGTC ATCCTGAATA ACGCCGGTCC GCGCTACTAT
ATTACGCGCG TCATCAAAGA AGGTGGGCAG GGGGCAGTCT TTGAGGCGAT TGGCGATGAT
GGTCGCACCT ATGCGATCAA GCAGATGCTG GATCGTTTCA CCGACCCGCG CGAACGCGAC
GAAGCCATCG CGCGCTTCGA GGCGGAGGCG AAAATCCTGG AGCGCCTGCG GCATCCGCGT
ATTCCCCGCG TCTACGCCGA CTTCAAGGAT GAGGGGTATC ACTACCTGGC GATGGACTTC
GTGCGCGGGT CCGACCTGGA AGACATCATC CGGCGCGAGC GATTCATTCC CGAAGAGCGC
GCTTTGCGCT GGGCGGATCA GATCTGCGAC GTGCTGGAGT ATCTCCACCA GCAGAAGCCG
CCGATCATTT TTCGCGACAT TAAGCCGTCG AATATCATGA TCGAGCCGGA CGGCAACGTC
AAACTGATCG ATTTTGGCAT TGCGAAAGCG TTGCAACCAT CGCAGCGCGG CACGCAGATC
GGCACTCCTG GCTATGCGCC GCCGGAGCAG TATCAGGGTA TCGCCACACC TGAGTCGGAC
ATCTTTTCGC TCGGTGCGAC CCTGCACCAT ATGCTCACCG GACGCGACCC GCGCGATGAG
CCGCCCTTTT CGTTCCCGCC GGTCTATGCG TTGCGTCCGA ACGTCTCCAA GCGCACGTCT
GATGCGATTA TGAAGGCGTT GAAGATGAAG CCGGAGGAAC GCTATCGAAG CGTGGCAGAG
TTTCGCCGCG CGCTGCTGCC AGAACGCGCG CCCGCGCAGG TGCGCGTCGT TCCGGCAACG
CAGGCGCTTC CGGCGCCTGC GCAGGTTGCT GCACCGGTGA CACCGCAGCC TGTTGCGGCA
TCAGCAGGTC CGGCGGCGCC CCAATCCACA GCGCCGCCGA CCAGTCGGGT CACTCCGACA
GGATCGCCAT CCGCTCCGGC AGCCGCACCA GCACAAAAAC CGGCAGCACG GCAAAAGAAG
CATCAATCGA CAAGATGGGG CGCTGTGCTC TTTGCGCTGG TGGTCATCGC GCTGCTGGCG
GCGACCGTTG CGCTGGCGTT TCCCGATTGG ACCGTGCGCA CCATTCGGTC GATCCCGGCG
CTGGCGACAC CAACGCCGCA ACGTCTGATT CAGCAGCCGT TCACGGTCGA AAATATCGAG
GTAGTCGTAC CGCCAGGAGG CGATGTCCGG CAGGCGTTTG TTCTTGCATA TACGCGCGCT
GTTCAGGAAC AGTTTGGACC GCAGGCGCAG ATCCACACCA GCGTGCCGTT GTCGTACATC
GGCGGCGAAC CGCAGAAGAT TGCCGAGGAT GAGAATGGGA CCAAGTATCG CGCCTCGATC
AGCGGGTTTA TTCTTGTGCC TGCCACACCA TAG
 
Protein sequence
MTDVQQILCP KCHKPNLRRA RFCQHCGHDV ILNNAGPRYY ITRVIKEGGQ GAVFEAIGDD 
GRTYAIKQML DRFTDPRERD EAIARFEAEA KILERLRHPR IPRVYADFKD EGYHYLAMDF
VRGSDLEDII RRERFIPEER ALRWADQICD VLEYLHQQKP PIIFRDIKPS NIMIEPDGNV
KLIDFGIAKA LQPSQRGTQI GTPGYAPPEQ YQGIATPESD IFSLGATLHH MLTGRDPRDE
PPFSFPPVYA LRPNVSKRTS DAIMKALKMK PEERYRSVAE FRRALLPERA PAQVRVVPAT
QALPAPAQVA APVTPQPVAA SAGPAAPQST APPTSRVTPT GSPSAPAAAP AQKPAARQKK
HQSTRWGAVL FALVVIALLA ATVALAFPDW TVRTIRSIPA LATPTPQRLI QQPFTVENIE
VVVPPGGDVR QAFVLAYTRA VQEQFGPQAQ IHTSVPLSYI GGEPQKIAED ENGTKYRASI
SGFILVPATP