Gene Rcas_3324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3324 
Symbol 
ID5540822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4337611 
End bp4338345 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content55% 
IMG OID640895441 
Productmethyltransferase type 11 
Protein accessionYP_001433392 
Protein GI156743263 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCTAC AGACAAATAA GCGTCAATGG GAAGATATCG GTCAGCTCGA CCCGTTCTGG 
GGAATGACCG GCACGAACCG TTTTGATGGA TGGAACATCG AGGCGTTTTT GAACACCGGA
CACGAACAGG TTTCTCAACT GCTCCGACAG ATTGAACCGT TCAAGCGACC AGAGCAATGG
TCAACCGTGC TTGATTTCGG TTGCGGCGTT GGACGGCTTG CGCCCGCCTG GCGCACACAT
TTCGAGCATT ACATCGGTAT CGATATTGCA GAGAGCCTGA TCGTCAAAGC CCGTCAACTC
CACACCAACC TCAGTAAGGT GGATTTCGTC GTCAGCGCCA GCACGACACT GCCGATTGCA
TCGAACAGTT GCGATATGGT CTATGCCTGG GGCGTGCTGC AACACGTGCC CAATCAGACC
ATCGCACTCT GCTATGTTGC CGATTTTGTG CGAGTCATGC GACCGGGAGG TTTACTGGTC
TTTACGACCC TGGATTCGAT CCATCCCGTC TATCGACTGC AACCGCGCCG TCGCGCGTAT
GCGCTATTAC GAACGGTCGG CGTGCCAGCG GTGATCCTGT ACCACCATCT CAGACTCTAT
CCCCACGAAG TGCATCCCCT GCCAGGACAA CACGTGATTG CCCGGTTGAA GGCAACCGGG
GCGCGCGCTC TACAGTGCGA CGAATCGCCA TCCAATGCCC CGCACCGATG GCGGACATAC
TATGTAACAA AATGA
 
Protein sequence
MSLQTNKRQW EDIGQLDPFW GMTGTNRFDG WNIEAFLNTG HEQVSQLLRQ IEPFKRPEQW 
STVLDFGCGV GRLAPAWRTH FEHYIGIDIA ESLIVKARQL HTNLSKVDFV VSASTTLPIA
SNSCDMVYAW GVLQHVPNQT IALCYVADFV RVMRPGGLLV FTTLDSIHPV YRLQPRRRAY
ALLRTVGVPA VILYHHLRLY PHEVHPLPGQ HVIARLKATG ARALQCDESP SNAPHRWRTY
YVTK