Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3287 |
Symbol | |
ID | 5540785 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 4268381 |
End bp | 4268884 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640895405 |
Product | ferroxidase |
Protein accession | YP_001433356 |
Protein GI | 156743227 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1528] Ferritin-like protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.492648 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTCAGCG AGAGTATTCA GCAGGCGATC AACAAGCAGA TCACCCACGA GTTTTCGGCG TCCCATGCCT ACATGGCAAT GGCGGCGTAC TTCGAGTCGC TGTCGCTGAC CGGCTTTGCC CACTGGTTCC GGGTGCAGAG CGAGGAGGAA CGCGAGCACG CGCTGCGCTT CTTCGATTAT GTCAACGACC GTGGCGGTCG CGTAACTCTC GGCGCCATCG ACGAGCCGCA GAACGAGTTC GCCTCGCCGC TCGACGCCTT TGAGCACGCC CTGGCGCACG AGCAGCGCGT CACTGCCGCC ATCCACGCCA TCTATACGCT TGCGGCGCAG GAAAACGACT ACGCCACAAT GAGCATGCTC AAGTGGTTTA TCGACGAACA GGTTGAGGAA GAGAAGAGCG CACAGGAGAT CATTCAGCAC CTCAAACTGA TCGGCGACGA TGGCGCCGGT CTCTTGATGC TCGACCGGCA GCTGGCGGAG CGGGAGGGGG AGGAGGAAGA GTAG
|
Protein sequence | MLSESIQQAI NKQITHEFSA SHAYMAMAAY FESLSLTGFA HWFRVQSEEE REHALRFFDY VNDRGGRVTL GAIDEPQNEF ASPLDAFEHA LAHEQRVTAA IHAIYTLAAQ ENDYATMSML KWFIDEQVEE EKSAQEIIQH LKLIGDDGAG LLMLDRQLAE REGEEEE
|
| |