Gene Rcas_3287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3287 
Symbol 
ID5540785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4268381 
End bp4268884 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content61% 
IMG OID640895405 
Productferroxidase 
Protein accessionYP_001433356 
Protein GI156743227 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1528] Ferritin-like protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.492648 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAGCG AGAGTATTCA GCAGGCGATC AACAAGCAGA TCACCCACGA GTTTTCGGCG 
TCCCATGCCT ACATGGCAAT GGCGGCGTAC TTCGAGTCGC TGTCGCTGAC CGGCTTTGCC
CACTGGTTCC GGGTGCAGAG CGAGGAGGAA CGCGAGCACG CGCTGCGCTT CTTCGATTAT
GTCAACGACC GTGGCGGTCG CGTAACTCTC GGCGCCATCG ACGAGCCGCA GAACGAGTTC
GCCTCGCCGC TCGACGCCTT TGAGCACGCC CTGGCGCACG AGCAGCGCGT CACTGCCGCC
ATCCACGCCA TCTATACGCT TGCGGCGCAG GAAAACGACT ACGCCACAAT GAGCATGCTC
AAGTGGTTTA TCGACGAACA GGTTGAGGAA GAGAAGAGCG CACAGGAGAT CATTCAGCAC
CTCAAACTGA TCGGCGACGA TGGCGCCGGT CTCTTGATGC TCGACCGGCA GCTGGCGGAG
CGGGAGGGGG AGGAGGAAGA GTAG
 
Protein sequence
MLSESIQQAI NKQITHEFSA SHAYMAMAAY FESLSLTGFA HWFRVQSEEE REHALRFFDY 
VNDRGGRVTL GAIDEPQNEF ASPLDAFEHA LAHEQRVTAA IHAIYTLAAQ ENDYATMSML
KWFIDEQVEE EKSAQEIIQH LKLIGDDGAG LLMLDRQLAE REGEEEE