| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3272 |
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| Symbol | |
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| ID | 5540770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4246755 |
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| End bp | 4248131 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640895390 |
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| Product | hydroxypyruvate reductase |
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| Protein accession | YP_001433341 |
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| Protein GI | 156743212 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2379] Putative glycerate kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.571627 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCGG CGTTGTTTCT GACGGCAACT CTCCGGTCTC TTCCGCACGG CGCTGCCGTG
ACGCGCATCC TTGCGGCGGC AGTTGCCGCC GTTGAGCCGG GCGCTGCGGT GCGACGCTTC
CTGCGGCGTG ATGGCGAGCG CCTCATTGCC GGCGACAGGG TGTACCATCT CCGCGACTTC
GACCGCTGCT GGATCGTTGG CGCCGGCAAA GCGGGAGCGC CAATGGCTGC CGCTGCCGCC
AGTATTCTCG GCGAATGCGT GACCGGCGGT GTCGTCGTCG TCAAGGAAGG GCACGTTGCT
GCCGAAAGCC TGGCAGTGTT GCAACCACGG ATCGACGTGA TCGAAGCCGG GCATCCGATT
CCTGATGCGC GCGGCGTCGC CGCTGGCGAA CGCATCGCCG ATCTGTTGCA GCGCACCGGC
GAACGCGACC TGGTGCTTGC ACTGATCTCT GGCGGCGGTT CGGCGCTGCT GACGCGCCCT
GCACCGGGTA TTACCCTCGA TGATCTGCAA CGTCTGACAG GGTTGCTGCT AGCGTGTGGC
GCGTCGATTC ATGAGATCAA TACCTTGCGT CGTCACCTCG ACACGCTGAA AGGCGGCGGG
CTTGCGCGCC TGGCAGCGCC GGCCGCCGTC GTCACCCTCG TCCTGTCCGA TGTCGTTGGC
GATCCGCTCG ACGTGATCGC CTCCGGTCCC ACTGTTGCCG ACCCGACCAC CTTTGCCGAT
GCGTTGGGTG TGCTCGAACG GTACGAACTG GTTCCTCAGA CGCCGGTTGC TCTTCTGGAG
CGGTTGCGGC GCGGCGCGCG CGGTGAGATC GATGAGACCC CCAAACCGGG CGATCCGGCG
CTGGCGCGGG TCCACAACCT GATCATCGGC AGCAATCGCC TGGCAGCCGA AGCGGCGCTG
GCAGCCGCGC GCAACGAAGG GTTCAATACC CTGCTGTTGA CGACATTTCT GCAAGGCGAA
GCGCGCGTCG TCGGGCGTGT GCTGGCTGCC ATTGCGCGCG AGATTGTCGC CCACAATCAA
CCCATCCCTC GACCGGCATG CGTGATCGCT GGCGGCGAAA CGACTGTCAC CCTGCGCGGC
GACGGTCGTG GTGGGCGCAA TCAGGAACTG GCGCTTGCCG CAGCCGCCGA TCTCGCCGGC
ATCCCTGGTG CGCTGCTGGT CACCCTGGCG ACTGATGGCG GTGATGGACC GACTGATGCA
GCCGGCGCCG TCGTCAGCGA TACGACGATC CGGCGTGCTG CGGCGCTGGG AATCGATGCA
GCCGCAGCGC TGGCGCGCAA CGACAGTTAT CCGTTCTTCG CTGCGCTCGA CGACCTTCTG
AAACCGGGTC CTACGCAAAC CAACGTCAAC GATCTGGCGC TGATCGTAGT GGTGTAG
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| Protein sequence | MNPALFLTAT LRSLPHGAAV TRILAAAVAA VEPGAAVRRF LRRDGERLIA GDRVYHLRDF
DRCWIVGAGK AGAPMAAAAA SILGECVTGG VVVVKEGHVA AESLAVLQPR IDVIEAGHPI
PDARGVAAGE RIADLLQRTG ERDLVLALIS GGGSALLTRP APGITLDDLQ RLTGLLLACG
ASIHEINTLR RHLDTLKGGG LARLAAPAAV VTLVLSDVVG DPLDVIASGP TVADPTTFAD
ALGVLERYEL VPQTPVALLE RLRRGARGEI DETPKPGDPA LARVHNLIIG SNRLAAEAAL
AAARNEGFNT LLLTTFLQGE ARVVGRVLAA IAREIVAHNQ PIPRPACVIA GGETTVTLRG
DGRGGRNQEL ALAAAADLAG IPGALLVTLA TDGGDGPTDA AGAVVSDTTI RRAAALGIDA
AAALARNDSY PFFAALDDLL KPGPTQTNVN DLALIVVV
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