| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3191 |
|---|
| Symbol | |
|---|
| ID | 5540689 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | + |
|---|
| Start bp | 4149985 |
|---|
| End bp | 4150191 |
|---|
| Gene Length | 207 bp |
|---|
| Protein Length | 68 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640895312 |
|---|
| Product | ribosomal protein S20 |
|---|
| Protein accession | YP_001433263 |
|---|
| Protein GI | 156743134 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0268] Ribosomal protein S20 |
|---|
| TIGRFAM ID | [TIGR00029] ribosomal protein S20 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000247507 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0669339 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACCGAT CACGGGTCAA GACCGCAATC CGAAAAGCGG AGCGCGCTAT CTTTGCCGGC
GCCCCCGAAC CGGAACTGGT CCGTGAGGCG ATGAGCCTGC TGGATCGCGC CGCAGTCAAG
GGGATCATCC ACAAAAACAA CGCCGCCCGG CGTAAGTCGC GTCTGGCAAA GAAACTCGCC
AAAGCCACAG CGACTCCAAC ATCTTGA
|
|---|
| Protein sequence | MYRSRVKTAI RKAERAIFAG APEPELVREA MSLLDRAAVK GIIHKNNAAR RKSRLAKKLA
KATATPTS
|
|---|
| |