| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3187 |
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| Symbol | |
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| ID | 5540685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 4143699 |
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| End bp | 4145102 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640895308 |
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| Product | aspartate kinase |
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| Protein accession | YP_001433259 |
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| Protein GI | 156743130 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0527] Aspartokinases |
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| TIGRFAM ID | [TIGR00656] aspartate kinase, monofunctional class
[TIGR00657] aspartate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0425815 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0885433 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCTTGC TGGTGATGAA ATTTGGCGGA ACATCGGTCG GCGACGCCGC TGCCATTCGG
TCAGTCGCGG CGATTACCGA GGCGCAACGC GCAACGTGGG GACAGGTTGC ACTGGTGGTT
TCGGCGATGA GCGGCGTGAC CGATATGCTG ATCCGCGGCG CCACCACGGC GGCATCCGGC
GATCAGCAGA CGTTTCGCGC TATGGATCGC CTGCTGCGCG AAAAGCATGC CGCTGCGCTG
GCGGAACTCG TCTCCGACGA GCGCGAACGC GCGGACGTGA GCGATCAGGT CTTTCGGCTG
ATCGACGAGT TCAGTATGCT GTGCCACAGT GTCGCGGTGT TGGGTGAGTT GTCACCACGT
GCCGTCGATG CCATTTCAAG CCTTGGCGAG CGCATGAGCG TGCGGGTTGT CGCTGCCGCG
TTACGCGCGC GCGGCATCCC TGCCGAAGCG CTCGATGCCA CCGGCTTCGT GGTGACGACC
GCACATTTCG GCGATGCACG TCCGTTGCAA GACGTCACGC GCGAACGCAC TCGCGCACAG
GTGCTCCCAC TGCTCGAACG CGGCATCGTG CCGGTGATTA CCGGTTTTAT CGGCGCTACT
GAGCAGGGTG TCACAACCAC CCTGGGGCGC GGCGGCAGCG ATTACAGCGG TGCGATCATT
GGCGCTGCGC TCGATGCCGA TGAAGTCGAT ATCTACACCG ACGTCGACGG CGTGATGACC
ACCGACCCGC GGCTGTCGCC TGATGCCCGC GTGATCCCGG TGCTCTCCTA CGCCGAAATG
GGTGAACTGG CATATTTTGG CGCCAAAGTG CTACACCCGC GCACAATCCG CCCGGTGGTC
GAGCGTGGCA TTCCGCTGCG GGTGCGCAAC ACCTTCAATC CGTCTCATCC CGGCACCCTG
GTCGTTCAAG ACGTTGCATC GAACGGGCAG ACCGTCAAAG CCGTGACGGC TATCCGCAAC
CTGAGCCTGA TCACCGTCGA AGGGCGCGGC ATGATCGGCG TGCCCGGCGT TGCAGCGCGC
ACTTTTGGCG CTGTCGCCAG TGTTGGCGCG AATGTGTTGA TGATCTCTCA GGCGTCGTCG
GAGCAGAGCA TCTGCTTCGT TGTGCCATCC AACACCGTGC CACAGGTGAC CTACGCGCTC
GAACACAATC TGGCGATGGA ACTGGCGCGG CGCGACATCG ACCGCATCTG GGCGCGCGAT
GACGTGGCGA TCATCACGGC AGTCGGCGCG GGCATGCGCG AGACTCCTGG CGTTGCGGCG
CGGGTCTTCG GCGCGCTCGC CGAGAGTCAG ATTAACGTGA TTGCGATTGC TCAGGGGTCA
TCGGAGTGTT CGATCAGTAC GGTCGTTGCG GCGTCGGATT GTGATGCCGC CGTGCGCGCC
GTTCATCGCC TGACGCAAGG ATGA
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| Protein sequence | MPLLVMKFGG TSVGDAAAIR SVAAITEAQR ATWGQVALVV SAMSGVTDML IRGATTAASG
DQQTFRAMDR LLREKHAAAL AELVSDERER ADVSDQVFRL IDEFSMLCHS VAVLGELSPR
AVDAISSLGE RMSVRVVAAA LRARGIPAEA LDATGFVVTT AHFGDARPLQ DVTRERTRAQ
VLPLLERGIV PVITGFIGAT EQGVTTTLGR GGSDYSGAII GAALDADEVD IYTDVDGVMT
TDPRLSPDAR VIPVLSYAEM GELAYFGAKV LHPRTIRPVV ERGIPLRVRN TFNPSHPGTL
VVQDVASNGQ TVKAVTAIRN LSLITVEGRG MIGVPGVAAR TFGAVASVGA NVLMISQASS
EQSICFVVPS NTVPQVTYAL EHNLAMELAR RDIDRIWARD DVAIITAVGA GMRETPGVAA
RVFGALAESQ INVIAIAQGS SECSISTVVA ASDCDAAVRA VHRLTQG
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