| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3170 |
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| Symbol | |
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| ID | 5540668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 4113290 |
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| End bp | 4116025 |
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| Gene Length | 2736 bp |
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| Protein Length | 911 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640895291 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_001433242 |
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| Protein GI | 156743113 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5002] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCATA CAACATCAAC ACATCTGACC CGCTGGTTGA ACGCCAACCG CACGGACCTG
CTGCCGCTCT GGATTGCTGC AGGCGATGAT CTGTTCGCGG CAGACCACCA CGCTCCGGCG
CGAAACGGCG AAGCGATCAC GGTGCATCCC GATGAGCGCA AAGTGATCGT AACAGCGCTG
TACGATGGGT TGATCGCTGC TGCGGGCGGT GATGAACAAC CCCTTGACGA GTGTCTGACG
GCGCTGCGTG CACTGCGGAG CAGTATCGGC GAGGACGACC TGCCACGCCA GATTATGCTC
TTCCAGCGAC TGCGCAGCAT GGGTCGTCGT GCGCTGTATC GTGAGTCGAT GGAGGCAACC
GCGCGACAGC CTCAGGATGA TGTATTTTAT CATCTCCTCG ATGCACTGGA TGACCTCATC
GACTATGCGA TTACGCGGCT GGTCGAACGC TGGGTTGGCG CCGCGCACAG AGTGTTGAAC
GAATTGAACG AAACCCGCAT GCTGGTCGAA AGCCTGTACC GTGATGCGGA AGTCACCGAC
CGCACGACGC TGCAAGTCTC CCGGCTCAAC CAGCTTGCGC GCGAACTATC ATCCACCTTC
GACCGTAAGG AGCACCTGCA CAGTATCAGC GTGACGCTCG CTGAGGTGCT GGCGCCTGTC
GTCGTCGATA TCTGGCTGCT TGCAGAGGAT GCCACTCGCC TCGAACTGGC ATGGCGCCAT
GGCGCTCCTA TGCCGGATAC GCGATCCATA CCGCTGGAAG CGACCCACGA TCCGGTGGTT
CAGACGCTTC AGCAGCGGGA ACTTTTCCTG GCATCCAACC TCGTTGCAGC CGATCAGAAT
GCGTGGCACA TTCCAGATGT CGCCGTGCTC GGCATTCCGC TCATCACGCA GAGCGGCGTC
ACCGGCGTCA TTCTGTGCCA GGGTGACGAG CGCACGCTCG CTGATCGTTC ACAGCAGGAC
TTTGCGCGGT CTGTCGTCGG GCAGGCAGCG ATTGCTCTGG AGAATGCGCG ACTGTATGCC
GAGGTGCGCG CCCTCAACGC CGATCTGGAG CGGCGCATTG CCGAACGCAC CCGCGAATTG
AAGATCGAAC GCGATACGCT CGAAACACTG AATGCCATTG CGCTCGAAGT CAGCAGTACG
CTCGATGGCG ATGAGATTAT GAGCAACTCG CTCAAGACCC TGGCAAAACT GATCGGCGTC
CAACACGGAT CGATCATGCT CCTCGACCGG GAAACCGACC AACTGGTCGA TCGCGCAGTC
CTGGGCAAAA GCGACAATGT CGGGTATGTG CGCTTCTCGC TCGGGCAGGG GATTGTCGGA
TGGGTTGCGC ATCATCGCAA GCCCCTGATC GTCGATGATG TCACTGCCGA CCCGCGCTGG
ACGCCGCCAC CAATCGACGA TCCCCTGGCA AAACGCCAGG GATCGATGAT CGCAGTGCCG
CTCATCGCCC ATCATGAAGT GCTCGGCGTT CTGGTGCTCT CCCACGAACA GCCCGCGTAT
TTCCGCGAGG AACACCTGCG ACTGCTCGAC GCTTCCGCCA AACAGATTGC GATTGGCATT
CACAACGCAC AGGTCTATCA GCATGCGGAG CAGCAGTACT TCCACCGCTA CGAAATGCAG
CAGCGCCAGG AACAGGCGGT CAGTCAGAGC ACGGCCATTT TGCAAAGCCT CTCCGATGGG
GTGATTGTGT GCGACCAAAG CGGTTCGGTG TTGACGGCGA ACCTGGCGGC GGAAAAGATT
CTCGAGCGCC CAATCGAAGA GTTGGTGACA TGGAACCTGG AGGACTTGTT GCGACGATTG
CTGGGGCGGC GCGTCGATGA ACTGTCGCTC AATGATTTGT TGCGCAATCC CTGGGACGAT
CAGCACCGGC CACGCACTCT CTCCACAACC TTCCAGATTG GTCCGCGAAC GATCAACATC
ACGCTCGACC CGGTCATTTC GAGTAAAGAG ACGCTGATCG GCGCGGTCGC AGTGTTCCGC
GACCGCACTC GCGAGGTCGA GTCGGATCGG CTGAAGACCG AGTTCATTGG CACGGTCTCA
CACGAATTGC GCACCCCAAT GACATCGATC AAAGGGTTTA CGCAGCTCCT TGCGATGGGC
GGCCTGGGAC CGCTCAACGA GACGCAGAAA GAGTTTCTCG GCATTATTCA GTCGAATGCC
GAGCGTATGA TTGCGATCAT CAATGATCTG CTCGACATCA CTAAGATCGA GACGGGAAGC
GTTGAACTTG AGATCCGCCC ACTCCACGTT GCCGAAACGC TCAGCACCGT CATGCTCGAC
CTTCAGCCGA AAATCCAGGA TCGGCAGCAA CACCTGTCGT TGAGCATTCC CGCCGGATTG
CCACTCGTGC GCGCCGACGC TCGACGTTTC AATCAGATCC TCTTCAATAT CGTTTCGAAC
GCTGTCAAAT ATACGCCGCG CGGCGGCTCG ATCACCGTCG AAGCGCGCGA AGTCACTGCT
GACGCGGTTC CCGACGAAGA ACGCGACGGG TTGCGTCCTG GACGGTATGT TCAGATCGAT
GTGCGCGATA CCGGCGTCGG GATTGCGCCG GAAGACCTTC CTCGCATCTG GGAGCGGTTC
TACCGCACCG AGAATCCGCT CAAGGTCGAA GCCGGCGGTA CCGGTCTCGG TCTCTCGCTG
GTCAAACCCC TCATCAGACT CCTCGGCGGG CGCATCTGGG TCGAAAGCTG CATCAATGAA
GGCAGTGTCT TCAGTTTTGT GATTCCGGCG GTGTAA
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| Protein sequence | MQHTTSTHLT RWLNANRTDL LPLWIAAGDD LFAADHHAPA RNGEAITVHP DERKVIVTAL
YDGLIAAAGG DEQPLDECLT ALRALRSSIG EDDLPRQIML FQRLRSMGRR ALYRESMEAT
ARQPQDDVFY HLLDALDDLI DYAITRLVER WVGAAHRVLN ELNETRMLVE SLYRDAEVTD
RTTLQVSRLN QLARELSSTF DRKEHLHSIS VTLAEVLAPV VVDIWLLAED ATRLELAWRH
GAPMPDTRSI PLEATHDPVV QTLQQRELFL ASNLVAADQN AWHIPDVAVL GIPLITQSGV
TGVILCQGDE RTLADRSQQD FARSVVGQAA IALENARLYA EVRALNADLE RRIAERTREL
KIERDTLETL NAIALEVSST LDGDEIMSNS LKTLAKLIGV QHGSIMLLDR ETDQLVDRAV
LGKSDNVGYV RFSLGQGIVG WVAHHRKPLI VDDVTADPRW TPPPIDDPLA KRQGSMIAVP
LIAHHEVLGV LVLSHEQPAY FREEHLRLLD ASAKQIAIGI HNAQVYQHAE QQYFHRYEMQ
QRQEQAVSQS TAILQSLSDG VIVCDQSGSV LTANLAAEKI LERPIEELVT WNLEDLLRRL
LGRRVDELSL NDLLRNPWDD QHRPRTLSTT FQIGPRTINI TLDPVISSKE TLIGAVAVFR
DRTREVESDR LKTEFIGTVS HELRTPMTSI KGFTQLLAMG GLGPLNETQK EFLGIIQSNA
ERMIAIINDL LDITKIETGS VELEIRPLHV AETLSTVMLD LQPKIQDRQQ HLSLSIPAGL
PLVRADARRF NQILFNIVSN AVKYTPRGGS ITVEAREVTA DAVPDEERDG LRPGRYVQID
VRDTGVGIAP EDLPRIWERF YRTENPLKVE AGGTGLGLSL VKPLIRLLGG RIWVESCINE
GSVFSFVIPA V
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