| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3151 |
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| Symbol | |
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| ID | 5540649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4086301 |
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| End bp | 4087902 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640895272 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001433223 |
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| Protein GI | 156743094 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGATGGA TAACGCGCTG GATGAGCATA TGCTGTGTGG TATTGCTGAC CGCCTGTAGC
ACAACGCAGG CATTGCAGGA GCCGCCAACT CCTACCCCCC TGCCGCCCGA TCCGGCGCTC
GAACGCCCCA CGTACACGGT TCAGCGCGGT GCTATCGAGC AGGTGTTCAC GGTCACTGCC
CGCGCAACGC CGGTCGATAT GGCGCGGCTG GCATTCCGAC GTGATGGGCG CGTCAACGTC
GTGAATGTCA GTCGTGGCGA TGTCGTCAAG GAAGGCGATG TTTTGGCGGA ACTTCAGCAG
GAGGAGGCGC TCGACGAGTT GCGTCGCGCC GAGGACGATC TGGCGCAGGC GCGACGCGAC
CTGGAGAGTG CGCAGCTGGC AAAGGAGAAA CGGATCAAGG AACGCGAACT CGATGTGGAT
CGCGCCAGGC GCGAACTCGA ACGATTGTTG CCTGGCGGTG AGGCGGATCT GTTCAAGGAA
TTGCAGGAAC GCCTCGAAGC GGCGCAGCGC GAGTTGCGCA CCACACGCGA TGATGCGTCG
TGGTCGAAAA CTTCAGCGGA CGAAGCGCTA CGCGACAGCG CCGAAGCGCT TTCCGACACC
CAGAAGGCGT ATAGTGTCGC CTACTGGAAC TGGGACTGGG TGCAGCGCTA TGGGACCGAC
CCGGAGAATC CATTTATCAA GAATGAGGCC GGGGTGCTGG TTCCCAATCG CCTCACCGAG
AAACAAAAGG AAGAGTTTCG TATGAAACTG GTGCAGGCGG AACGCGCATT ACGCGACGCC
GAACGCTCGG TCGAGCAGGC GCAGCGCGCC CGTGATCGCG CATATGAAGA TGAAGTCGTC
AAAATTTACG AGGCGGAGAA GAAAGTCGAG GAAGCGCAGC GCGCGCTTGA GACCCTGCTC
CAGGGCAAGA ACAAAGCAAT CGAAGACGCC CAACTCGCTC TCGAGCGGGC GCAGGTTGCA
CTGGAGGAAG CGCGCAACGA GACGCTCAAC AGCGCACTCC GCGCCGTGGA GAACGCCGAG
CGCGCCCTGG AAAAAGCACG CCGCCGCGTC GATGACGGGC GTGTCATAGC GCCGCAGGAT
GGAACCGTGC TGGCGGTCGC TATCGAGCCA GGAGCAACAG TGACCGCCTT CGAGCCGGTG
ATCGAGATTG CCGATCCATC GAACCTGGAG TTTGCCGCAA CTCTGAGCGC GCAGCAGATG
CGGCTGCTCT CCGAAGGTCA GAGTGTCGAG ATCCGCCTGC TATCGCGCCC CGACCTGGTG
ATCCCCGGCG TTATTCGACG CATGCCGGCG CCTTACGGGT CGGGCGGAAG CGGCGCCGTC
CAGGATCGCG ACGTCACCAC GCGCTTTCAA ATAGTCGATG CGCGCGGACA AACATTCGAG
GCTGGCGTGA CCGTTGCGCG AGTCAGCATC GTGCTGGAGC GCAAAGACAA TGTCCTCTGG
CTGCCGCCAG AGGCGATCCG GTCATTTGAG GGTCGCCGCT TCGTCATTGT CCGTGAAGGG
GAGCGTGAAC GCCGTGTGAC CGTGCGGGTC GGCATCGAAA CCGATGAGCG GGTCGAGATT
CTCGAGGGCC TGAACGAAGG CGATATTGTC GTTGGATCCT GA
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| Protein sequence | MRWITRWMSI CCVVLLTACS TTQALQEPPT PTPLPPDPAL ERPTYTVQRG AIEQVFTVTA
RATPVDMARL AFRRDGRVNV VNVSRGDVVK EGDVLAELQQ EEALDELRRA EDDLAQARRD
LESAQLAKEK RIKERELDVD RARRELERLL PGGEADLFKE LQERLEAAQR ELRTTRDDAS
WSKTSADEAL RDSAEALSDT QKAYSVAYWN WDWVQRYGTD PENPFIKNEA GVLVPNRLTE
KQKEEFRMKL VQAERALRDA ERSVEQAQRA RDRAYEDEVV KIYEAEKKVE EAQRALETLL
QGKNKAIEDA QLALERAQVA LEEARNETLN SALRAVENAE RALEKARRRV DDGRVIAPQD
GTVLAVAIEP GATVTAFEPV IEIADPSNLE FAATLSAQQM RLLSEGQSVE IRLLSRPDLV
IPGVIRRMPA PYGSGGSGAV QDRDVTTRFQ IVDARGQTFE AGVTVARVSI VLERKDNVLW
LPPEAIRSFE GRRFVIVREG ERERRVTVRV GIETDERVEI LEGLNEGDIV VGS
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