| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3148 |
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| Symbol | |
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| ID | 5540646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4079875 |
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| End bp | 4081128 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640895269 |
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| Product | hydrogenase (NiFe) small subunit HydA |
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| Protein accession | YP_001433220 |
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| Protein GI | 156743091 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1740] Ni,Fe-hydrogenase I small subunit |
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| TIGRFAM ID | [TIGR00391] hydrogenase (NiFe) small subunit (hydA)
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGCTC GTCCTTTGCC GTTGGAGGAA CGCCTTGCAG CGCGCGGTGT TTCGCGCCGT
CAATTCCTCA AGTTCTGCGC TGCGATGAGC GCCGCGCTCG CCCTGCCTTC CACCTTTACC
CCACGTATCG CCAGGGCGCT GAACACTGCC GAACGTCTTC CGGTTGTCTG GTTGGAGTTT
CAAGATTGCG CCGGCAACAC CGAATCCTTC CTTCGCGCCG AGTCGCCTGG CGTTGCCGAC
ATTGTGCTGG AGCAGATCAG CCTGGAGTAC CACGAGACGA TCATGGCGCC TGCCGGCCAT
CGCGCCGAAC ATTCGCTCGA TGCGGTCGTG GAAAACTATC CGGGGCAATA CATCGCCATC
GTCGAAGGGT CGATCCCCAT TGCCAATGGC GGGGTGTATT GCACGATCGG CGGTCGCACC
GCGTTGAGCA TCGCAGAGCG TGTGTGCTCG AATGCGCTGG CAACGATTGC GGTTGGCGCA
TGTGCCTGGG ATGGCGGTTG GCCCGCCGCC AGCCCGAATC CGACCGGTGC GGTTGGTGTG
CGCCAGGCGG TGCCGGGTCT CAAGAATCTG ATCAACCTGC CGGGCTGCCC GATGAATGTG
ATTAATCTAA CCGCCGTCAT TGTCCACTAC CTGACATTCA AACAACTGCC GGCAACCGAC
GAGCAGGGAC GCCCCTTCTT CGCCTATGGG CAGCTCATTC ACAACAACTG TGAGCGTCGG
GGGCACTTCG ACTCCGGTCG CTTCGTCGAG CGTTGGGGCG ACGAGGGGCA TCGCCTGGGA
TGGTGCCTGT ATAAGATGGG GTGCAAAGGA CCGCAAACGC TCTCGAACTG TCCTGCGGTC
GGCTGGAACG GCACGTCCTA CTGGCCCATC GGCGCCGGTC ACGGATGCGT TGGCTGCATG
TCGCCGCGTT TCTGGGATAC CATGTCGCCT TTCTATGAGC GACTGCCCAA TGTCGAAGGC
TTTGGCATCG AGGTGACCGC CGATACGCTG GGCGCCATTG CGGTTGGCGC CGTGGCGGCG
GCCGGTGTAG TCCACGGCGT TGCCAGCGCA ATCCGGGCGA GTCGTCATCC GATTGCGGCG
CATGGGGGTG AGACGCTGGT GGAAGCCGCA GAGCGCGCCG TTCAGGTGGT AGAGCAGATT
GCAGGACCGG TCAAAGCGGA GGAAAAGCCG GCAGAAGAGG CAGGGAAGCC GATGGCGTCG
GGTGACGCCA GGGAGAGCGT TCGTCCCGAT CGGGATGGAC CGTCCGCCTC CTGA
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| Protein sequence | MPARPLPLEE RLAARGVSRR QFLKFCAAMS AALALPSTFT PRIARALNTA ERLPVVWLEF
QDCAGNTESF LRAESPGVAD IVLEQISLEY HETIMAPAGH RAEHSLDAVV ENYPGQYIAI
VEGSIPIANG GVYCTIGGRT ALSIAERVCS NALATIAVGA CAWDGGWPAA SPNPTGAVGV
RQAVPGLKNL INLPGCPMNV INLTAVIVHY LTFKQLPATD EQGRPFFAYG QLIHNNCERR
GHFDSGRFVE RWGDEGHRLG WCLYKMGCKG PQTLSNCPAV GWNGTSYWPI GAGHGCVGCM
SPRFWDTMSP FYERLPNVEG FGIEVTADTL GAIAVGAVAA AGVVHGVASA IRASRHPIAA
HGGETLVEAA ERAVQVVEQI AGPVKAEEKP AEEAGKPMAS GDARESVRPD RDGPSAS
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