| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3137 |
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| Symbol | |
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| ID | 5540635 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 4068588 |
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| End bp | 4068971 |
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| Gene Length | 384 bp |
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| Protein Length | 127 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640895258 |
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| Product | large conductance mechanosensitive channel protein |
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| Protein accession | YP_001433209 |
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| Protein GI | 156743080 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1970] Large-conductance mechanosensitive channel |
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| TIGRFAM ID | [TIGR00220] large conductance mechanosensitive channel protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTCGAGG GCTTCAGAAA GTTCGTCATG CGCGGCAACG TCGTCGATCT GGCGGTCGGC
GTGGTGATCG GCACCGCGTT TAGCGCCGTG GTTAATTCAC TGGTCAATGA TGTCCTGCTG
GCAGCCATCG CCACGCTGGT GGGAAAGCCA GATTTTTCAG GTGTTCTGGT CTTTGGAGCA
GTACGGATTG GCGCCTTTCT CACGGCGGTC GTCAACTTCC TGCTCATCGC CGCTGCCGTC
TACTTCTTTG TAGTGACGCC GGTCAACAAA CTCAACGATC TGATCAGGAA ACCTGAACCG
CCTGCACCAC CAGAGCCTTC CACACAGGAG AAACTCCTGA TCGAAATTCG CGATCTCTTG
CGACAAAACA TAACCCGCTC TTAA
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| Protein sequence | MFEGFRKFVM RGNVVDLAVG VVIGTAFSAV VNSLVNDVLL AAIATLVGKP DFSGVLVFGA
VRIGAFLTAV VNFLLIAAAV YFFVVTPVNK LNDLIRKPEP PAPPEPSTQE KLLIEIRDLL
RQNITRS
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