| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3126 |
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| Symbol | |
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| ID | 5540622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4050052 |
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| End bp | 4051830 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640895245 |
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| Product | ABC transporter related |
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| Protein accession | YP_001433198 |
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| Protein GI | 156743069 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGGCG AGTCTTCTTC CACACGATCC ACCACGGTGC GTGGACAGGA CGCAGCACTG
GTTGTATTGC TCGCCAGCGT GATGGCGCCG CACTGGCGCA TTCTGGCGCT GGCGCTGCTC
ATCCTGCTGG CGACTGCGGC GTTGAATGCG GTTCCGCCGG CGCTGATGCA ACAGGCAATC
GATGGACCGA TTGCGCGCGG CGATCCTGAG GGGTTGTGGC TGATCGCAGC ACTCTACGGC
GGCGTGGCGA TTGTAATGTT TGCATTGCAG TATATCTACA CGCTGTTTCT CCAGATGGCA
GGGCAGCGAG CGCTGGCCGA TCTGCGGACA CGGCTGTTCG ACCATATGAC CCATCAGGAC
CAGAGGTTTT TCGGACGGAC TCCGACGGGC GATCTGGTCA CGCGCCTGAC CAGTGATGTG
GATACGATCA ATGCGCTCCT TTCGAGCAGT GTGGTGACTA TTCTGGTGGA GAGCGTGACG
TTGCTGGTCA TCGTCGGAGT CATGCTGGCA GTGAACTGGC GTCTGGCGCT TCTGTCACTG
GCAGTGCTTC CACTCTTGGC GCTGGTGACG CGCTTCTTCC GGCAGCGTAT TCGGCGATCC
TCAACGGGTG AGCGCACGGC GCTGGCGCGC GCAAGTGCGT TTCTGAGTGA ACGCATCGTC
GGGCTAACGG TGATCCAATT GTTTGGCGCG CAGCGGGCAA GCGCCGAAGA GTTCGATGGC
TACAATATGG CGTATCGCCG GGCATTGCTG GCGCTGCGTC GCCAGAGCGC GCTGTTTCTG
GCATCGCAGG AGATACTGTC GTCGGTCGGT CTGGCGCTCG TCCTGTATGG CGGAGGGCAA
GGAGTGTTGG CAGGATGGGC GACTCTTGGC ACGCTGGTGG CGTTTGTGCA GTATACCGAA
CGGGCGTTTC AACCGATTCT GCGTCTTGGC GAGCAGTACA ATACGGTGCA GATCGCGTTA
GGCGCCGCCG AGCGCATCTA TACGATGCTA CGAACAACGC CGGCGGTCGT CTCGCCGCCA
GATCCGGTCG TGTTGCCGCG GGTGCGTGGG GCGATTGAAT TGCGCCATGT CAGTTTCTCG
TATGTGCCGG AAGAGCCGGT GCTGCGCGAT GTTTCCCTTT CGATACCAGC CGGGCAGAAT
GTGGCGATTG TCGGCGCGAC CGGTGCGGGA AAATCGAGCC TGGTCGCGCT GCTGGCGCGG
TTCTATGATC CGCAACAGGG GCAGGTGCTG CTCGATGGGG TCGATATTCG GCGTCTGGAC
CTCACTATGT TACGCCGCGC CATTGCTGTC GTCCCGCAGG ACCCGGTGTG TCTTGCGGGC
TCGATTGCTC ATAATATCCG TCTGTTCCGC ACTGACATCA GCGATGCCGA TGTGCGTCGC
GCTGCGGAGT TGGCGAATGC AGCGCCGTTC ATCGAACGCC TTCCCGGTGG TTACGAGTTT
GAAGTGCTGC CCGGCGGCGC CAATCTGTCG GTGGGGCAAC GCCAACTGTT GGCGCTGGCG
CGCGCGCTGG CGCTCAGTCC CGAAGGAGTG CTCGCGCTCG ATGAAGCGAC ATCGAGCATC
GACAATGCAA CAGAGCGATT GATCCAGGAA GCGCTGGAAC GTATCCTGCG CACGCGCACC
AGTGTGGTGA TTGCTCATCG TCTGTCAACC ATTCGCAATG CGGATCGGAT AATTGTCATG
CATCGCGGGA GGATCGTCGA GGATGGTGAT CACGATGCGC TCCTCGCGCG CGGCGGCTTC
TATGCGCGAT TGCATCGCCA TCAGTTTGTT ATGCACTAA
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| Protein sequence | MTGESSSTRS TTVRGQDAAL VVLLASVMAP HWRILALALL ILLATAALNA VPPALMQQAI
DGPIARGDPE GLWLIAALYG GVAIVMFALQ YIYTLFLQMA GQRALADLRT RLFDHMTHQD
QRFFGRTPTG DLVTRLTSDV DTINALLSSS VVTILVESVT LLVIVGVMLA VNWRLALLSL
AVLPLLALVT RFFRQRIRRS STGERTALAR ASAFLSERIV GLTVIQLFGA QRASAEEFDG
YNMAYRRALL ALRRQSALFL ASQEILSSVG LALVLYGGGQ GVLAGWATLG TLVAFVQYTE
RAFQPILRLG EQYNTVQIAL GAAERIYTML RTTPAVVSPP DPVVLPRVRG AIELRHVSFS
YVPEEPVLRD VSLSIPAGQN VAIVGATGAG KSSLVALLAR FYDPQQGQVL LDGVDIRRLD
LTMLRRAIAV VPQDPVCLAG SIAHNIRLFR TDISDADVRR AAELANAAPF IERLPGGYEF
EVLPGGANLS VGQRQLLALA RALALSPEGV LALDEATSSI DNATERLIQE ALERILRTRT
SVVIAHRLST IRNADRIIVM HRGRIVEDGD HDALLARGGF YARLHRHQFV MH
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