| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3072 |
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| Symbol | |
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| ID | 5540568 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3977991 |
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| End bp | 3978635 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640895191 |
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| Product | TrkA domain-containing protein |
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| Protein accession | YP_001433144 |
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| Protein GI | 156743015 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0569] K+ transport systems, NAD-binding component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCTGA TCGTCGTCGG ATGCGGTCGT GTCGGATGTC TGCTGGCGCA GCAAATGTCT
GCCGAAGGGC ATTCAGTCGC AGTGATCGAT AAGAATCCGC AGGCGTTCAA ACGTCTGGGG
CGCGAGTTCC GTGGTCAGAC GGTGCTCGGC GTCGGTTTCG ACCGGGATAC CCTGCGTGAG
GCGGGCGTCG AGCGCGCCGA TGCGCTTGCA GCCGTGACGA ATGGCGACAA CTCGAACTAC
ATTACGGCAA CCGTTGCGCG GGATGTCTTC CGTGTGCCAA ATGTTGTGGC GCGCATTTAC
GATCCACAGC GTGAAGCGAT CTATCGGGAA CTCGGCATTC GCACGATCAG TTCAACCAGT
TGGGCGGTGC ATACGATTCG CCGAATTCTC CGCGGCGACG AAACGGTTTC ATCGATTCAG
TTCGGCAGCG GAGAAGTGGA GATTGCCGAA GTGACGATCA GCGGACGTCT TGTTGGTCAC
TTTGTGCGCG ATCTGTCGGT ACCCGGAGAG ATCATGCCGG TGGTCATCGT GCGTCGCGGG
CGTGCATTTC TGCCGACTCC CGGCGTGCTG CTCGAAGACG GCGATGTGGT GCACGTGGCG
GTGTTGGCGA CGGCGACCGG GCTGCTCGAC TCGATGGTTC AGTAA
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| Protein sequence | MHLIVVGCGR VGCLLAQQMS AEGHSVAVID KNPQAFKRLG REFRGQTVLG VGFDRDTLRE
AGVERADALA AVTNGDNSNY ITATVARDVF RVPNVVARIY DPQREAIYRE LGIRTISSTS
WAVHTIRRIL RGDETVSSIQ FGSGEVEIAE VTISGRLVGH FVRDLSVPGE IMPVVIVRRG
RAFLPTPGVL LEDGDVVHVA VLATATGLLD SMVQ
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