| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3033 |
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| Symbol | |
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| ID | 5540529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3930825 |
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| End bp | 3932663 |
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| Gene Length | 1839 bp |
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| Protein Length | 612 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640895153 |
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| Product | citrate transporter |
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| Protein accession | YP_001433106 |
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| Protein GI | 156742977 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0471] Di- and tricarboxylate transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCTGA TTGTCTTTGG AGTGCTGGCG CTGACCATAA TCCTGTTCGC CAGTGATCGG
CTCCGCCTCG ATGTGGTTGC GCTGCTGGCG TTGCTGGCCC TGCTGTTGAC GGGAATCCTC
ACGCCAGCCG AGGCGCTCGC CGGATTTTCC GACCCGATTG TGCTGATCAT CGCCGGGTTG
TTTATCGTCG GCGCCGGATT GTTTCAAACC GGCGTCGCCG ATGCGTTGGG GCAGCAACTG
ATGCGCTTCG CCGGCGCCGG TGAAGCGCGC CTGATCGCCT CACTGATGCT CATTGTTGCG
TTGCTTTCGG CATTTCTCAG TTCAACCGGA ACCGTCGCTG TTTTTCTGCC GGTGGCGGTG
AGTCTGGCGC GACGCGCCGG CGTCAGCCCG GCGAAACTGC TGCTGCCGCT CGCCTATGGT
TCGCTGATCG GGGGCCTGCT GACCCTTATT GGAACGCCAC CCAATATCGT CGTCAGCAAT
CAATTGCAGG CAGCCGGACG CGCGCCGTTC GGGTTCTTTT CCTTTACGCC GATTGGACTC
GTGATGCTGG CGATCGGCAT TGGGTACATG ATTACCGTCG GGCGACACAT GTTGCCCGTG
CGCGCGCACC TTGCGGCTGC GTCAGGAAAC GGCAAACCAA TGGTCGATCC GGCGACATTG
CTGGCATTGT ACGACCTCCC CGGCAAACTG GCGCGCGTGC AGATCGAGCC TTCGTCGCCG
CTGGTTGGTC AAACGCTGGC ACAGGCGAGT TTACGCACCC GCTACCGCAT CAATGTCGTG
GACGTTGAGC CACGTGTTCG CCAGGGGGCA ACTGCCGCGC CACACATCGC CGATTCGGGT
GTAACGCTGC AACCGAGGGA TGTGCTGCTG GTCAAAGGCT CGGCGGAGGA TATTGCGCGG
CTGGCAAGGG AACAGCAAAT GCGCGTGCTG GCGACCGGCG TCAGCCCTGA CGATCTGATC
ACCGAGGAAA CCGGCATTGT GGAACTGGTG CTGACGCCAC GCTCACGCTT GATCGGGAAG
TCGCTGCGCG AGACGCGCTT CCAGGACACC TATCGGGTGC TGGCGCTGGC AATTCTGCGA
TTGGGCGCGC CGCTCGATGC CCCAACATCA CAGGTGGAAC TGCGATTTGG CGACACGTTG
CTGGTTCAGG GAACATGGGA ACGGATCACC TCGCTACTCG ATGAACGCAA CGATTTTGTG
GTTGTCGGCG AGGTGCATCG TCCACCGACA AAACGCGCTC TAACCCGACG CGCCCCCGTT
GCGCTGGCAA TCATGCTGGG CATGCTGATT CTCATTTCGC TCGATATACT GCCCATGGTG
ACCGCCGTGC TGCTTGCCGC CGTCGCTATG GTGCTGACCG GCTGCGTGTC GATGGAAGAA
GGGTATCGGG CGATCAACTG GGAAAGCGTT GTGCTGATTG CCGGAATGCT GCCGATGGCG
ACAGCGCTCG ACAAGACCGG CGGATTGCAA CTGATGGCGA GTGGGTTGAC AGCAACGCTC
GGCGCACTGG GTCCGCTAGC GCTTATGGCG GGGCTGTTCA CGCTCACGGC GCTCTTCAGT
CAGTTCATTT CCAACACTGC AACCACCGTG CTGATGGCGC CGATCGCGTT GCAGGCTGCC
GCAGAACTCG GCGTCTCTCC CTACCCGCTG CTCATGATCG TCGCCATAGC CGCATCGACC
GCCTTCGCCA CCCCAATTGC CTCGCCGGTC AACACGCTGG TGCTCGGACC GGGGGATTAC
CGCTTCACCG ATTTTGTGCG GGTCGGAACG CCGCTGCTCG CGCTGACGTT GATCGCGTCG
CTCGTGGCTG TGCCGGTGGT GTTTCCGCTA TGGTTGTAG
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| Protein sequence | MMLIVFGVLA LTIILFASDR LRLDVVALLA LLALLLTGIL TPAEALAGFS DPIVLIIAGL
FIVGAGLFQT GVADALGQQL MRFAGAGEAR LIASLMLIVA LLSAFLSSTG TVAVFLPVAV
SLARRAGVSP AKLLLPLAYG SLIGGLLTLI GTPPNIVVSN QLQAAGRAPF GFFSFTPIGL
VMLAIGIGYM ITVGRHMLPV RAHLAAASGN GKPMVDPATL LALYDLPGKL ARVQIEPSSP
LVGQTLAQAS LRTRYRINVV DVEPRVRQGA TAAPHIADSG VTLQPRDVLL VKGSAEDIAR
LAREQQMRVL ATGVSPDDLI TEETGIVELV LTPRSRLIGK SLRETRFQDT YRVLALAILR
LGAPLDAPTS QVELRFGDTL LVQGTWERIT SLLDERNDFV VVGEVHRPPT KRALTRRAPV
ALAIMLGMLI LISLDILPMV TAVLLAAVAM VLTGCVSMEE GYRAINWESV VLIAGMLPMA
TALDKTGGLQ LMASGLTATL GALGPLALMA GLFTLTALFS QFISNTATTV LMAPIALQAA
AELGVSPYPL LMIVAIAAST AFATPIASPV NTLVLGPGDY RFTDFVRVGT PLLALTLIAS
LVAVPVVFPL WL
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