| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2990 |
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| Symbol | |
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| ID | 5540482 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3876888 |
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| End bp | 3878978 |
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| Gene Length | 2091 bp |
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| Protein Length | 696 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640895108 |
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| Product | hypothetical protein |
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| Protein accession | YP_001433065 |
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| Protein GI | 156742936 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1331] Highly conserved protein containing a thioredoxin domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.901065 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00330931 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCGAATG CTGAGCCAAC CAGGCGCCCC AATCGCCTGA TTAACGAGAC AAGTCCCTAT
CTGTTACAAC ACGCTTATAA TCCGGTCGAC TGGTATCCGT GGGGTGAGGA AGCGTTTGCG
CGCGCACAGG CGGAGGATAA GCCAATTCTG CTCAGTGTGG GATATGCAGC ATGTCACTGG
TGCCACGTGA TGGAACACGA GTCGTTCGAG GATGAAGAGA CTGCCGCGCT GATGAACCGG
TATTTCGTCA ATGTGAAAGT GGATCGTGAG GAACGACCGG ATGTCGACTC CATTTACATG
ACAGCGGTTC AGGCGATGAC CGGCAGCGGA GGCTGGCCGA TGACGGTCTT TCTGACGCCT
GATGGAACGC CATTCTTTGC AGGAACGTAC TTTCCGCCCG AGGATCGCTG GCAGATGCCG
TCGTTCCAGC GTGTGCTGCG CTCTGTCGCC GAGGCATATG CGACACGCCG CAATGACCTG
CTGGCGCGTG GGCGCGAATT GGTGGAGCGC ATGCGTGAGG CGTCCATGAT GCAGATTCCC
GGCAGTACGC TCACCCCTGC GGCGCTTGAT TCTGCATTTA TGGGTTTACA GCAGGCATTT
GATCCAGAAT ACGGTGGTTT TGGGCGCGCG CCCAAGTTTC CACAGCCAAT GACGCTGGAG
TTTCTGCTGC GCTATGCCGC GCGAACCGGC AGGGGCATGG AGATGCTGGA GCGGACGCTG
CGGGCAATGG CGGAAGGTGG CATGTACGAC CAGATCGGCG GCGGATTCCA CCGGTACAGC
GTCGATGCGC AATGGCTTGT GCCACACTTC GAGAAGATGC TGTACGACAA CGCGCTGCTG
GCGCGGGTCT ATCTGGAAAC GTTCCAGGCG ACCGGCAATG CGTTCTACCG CCGCATCGCT
GAAGAAACGC TGACGTATAT GCTGCGCGAG ATGCAGCATC CAGACGGTGG ATTCTTCAGC
ACGCAAGACG CCGACTCACT GCCGACGGCG GATGCCACGC ACAAGCACGA GGGCGCGTTC
TTCGTCTGGA CGCCTGCCGA GATCCGCGAG GCGCTCGGTG CGGACGCAAC CGTTTTTTCA
GCGTTGTATG GGGTGACGGA CCGCGGCAAC TTCGAGGGCA AGAACATTCT CCATGTGCAA
CGCTCCCCTG CGGAAGTGGC GCGCGTCATG GGCATGTCGG TCGAGCGGGT GGAATCTATT
GCTGAACGTG GACGGCGCGT GCTGTTCGCG GTGCGTCAGC ATCGCCCAAA ACCGGAACTC
GACGATAAAG TGTTGACCGC CTGGAATGGC ATGGCGCTGC GCGCGTTTGC GCTTGGCGCC
ATAGTTCTGG ATCGTGAGGA GTATCGAACA GCGGCGGTAC GCTGTGCAGA GTTCGTCCTG
CGTGAATTGC GCCGCGCCGA TGGTGAACTG CTGCGTTCCT GGCGGCAGGG CGTGGCCAAC
CCGACTCCCG CATTCCTGGA GGATTATGCG CTGCTCGCCG ATGGATTGCT GGCGCTGTAC
GAGGCGACAT TCGATCCACG CTGGCTGCTG GAGGCGCGCG CGCTGGCGGA TGCACTGCTG
GAACGGTTCT GGGATGATGG GATTGGCGGG TTCTACGATA CCGGGTCGCA CCATGAGCAA
CTCGTCATTC GCCCGCGCGA CACGGGCGAT AATGCGACGC CAAGCGGCAG TTCCGCCGCC
GCCGATGTGC TGCTCCGGCT GGCGCTGATC TTCGATGAGC CGCGCTACCG CGAACGAGCG
CTGACGGTTC TCAGTGCAAT GGCTCCCTTG ATGGAGCGCT ACCCGACCGG TTTTGGGCGT
TACCTGGCAG CCGCCGAATT TGCGCTGAGC CAGCCGCGCG AAATTGCGCT GATCGGCGAT
CCAGAGGCTG CTGATACACG CGCGCTGGCG GCAATCGCGC TGAAACCGTT TTTGCCGAAT
CGGGTGGTTG TTCTGGCGCG TCCTGGCGAG GACCCGCCGC GTATTCCCTC GCCGCTGCTC
GCGGGGCGCA CGCCGATCGA CGGCAGAGCA GCGGCTTATG TGTGTCAGAA CTATGCCTGC
CGGTTGCCGG TGACCAAGCC TGCGGATCTG GCAGCGCAGT TGCAACCGTG A
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| Protein sequence | MPNAEPTRRP NRLINETSPY LLQHAYNPVD WYPWGEEAFA RAQAEDKPIL LSVGYAACHW
CHVMEHESFE DEETAALMNR YFVNVKVDRE ERPDVDSIYM TAVQAMTGSG GWPMTVFLTP
DGTPFFAGTY FPPEDRWQMP SFQRVLRSVA EAYATRRNDL LARGRELVER MREASMMQIP
GSTLTPAALD SAFMGLQQAF DPEYGGFGRA PKFPQPMTLE FLLRYAARTG RGMEMLERTL
RAMAEGGMYD QIGGGFHRYS VDAQWLVPHF EKMLYDNALL ARVYLETFQA TGNAFYRRIA
EETLTYMLRE MQHPDGGFFS TQDADSLPTA DATHKHEGAF FVWTPAEIRE ALGADATVFS
ALYGVTDRGN FEGKNILHVQ RSPAEVARVM GMSVERVESI AERGRRVLFA VRQHRPKPEL
DDKVLTAWNG MALRAFALGA IVLDREEYRT AAVRCAEFVL RELRRADGEL LRSWRQGVAN
PTPAFLEDYA LLADGLLALY EATFDPRWLL EARALADALL ERFWDDGIGG FYDTGSHHEQ
LVIRPRDTGD NATPSGSSAA ADVLLRLALI FDEPRYRERA LTVLSAMAPL MERYPTGFGR
YLAAAEFALS QPREIALIGD PEAADTRALA AIALKPFLPN RVVVLARPGE DPPRIPSPLL
AGRTPIDGRA AAYVCQNYAC RLPVTKPADL AAQLQP
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