| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2965 |
|---|
| Symbol | |
|---|
| ID | 5540456 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | + |
|---|
| Start bp | 3845860 |
|---|
| End bp | 3846279 |
|---|
| Gene Length | 420 bp |
|---|
| Protein Length | 139 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640895084 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001433042 |
|---|
| Protein GI | 156742913 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.404614 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0000133236 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCAGAATC AACCTGTGGT TATCGCGCAG CGCAGCGGAC CCAGCCTGCT GATCCGCGCG
CTCTACTTCA TCGTCTTTGG ATTGTGGTTC AGCAGCATCT GGACGGCCAT CGCATGGGTG
TTGTGCGTCA CAATTATCGG TCTGCCGCTG GGTTTGTGGA TGTTGAACCG GCTGCCGCAG
GTTGTGACCC TGGCGCCGCA GCGTAGTGAT CTGGTGATTG CCAATGGACG CGCCTACTAC
GCCGATACAC CACAACGACC GTTTCTCCTG CGCGCCATCT GGTTTATGTT CGTCGGTTGG
TGGCTGAGCG CGCTGTGGCT GGCGCTCGCC TGGGCATTGT GCGCTTCCAT TATCGGCATG
GTCATTGCCT TCTGGATGTT CGACCGTGTG CCGGCGATCA TCACCCTGGC GCGCCACTGA
|
|---|
| Protein sequence | MQNQPVVIAQ RSGPSLLIRA LYFIVFGLWF SSIWTAIAWV LCVTIIGLPL GLWMLNRLPQ
VVTLAPQRSD LVIANGRAYY ADTPQRPFLL RAIWFMFVGW WLSALWLALA WALCASIIGM
VIAFWMFDRV PAIITLARH
|
|---|
| |