| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2940 |
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| Symbol | |
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| ID | 5540430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3815256 |
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| End bp | 3816203 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640895060 |
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| Product | chaperone DnaJ domain-containing protein |
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| Protein accession | YP_001433019 |
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| Protein GI | 156742890 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
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| TIGRFAM ID | [TIGR02349] chaperone protein DnaJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.383113 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00256478 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCTATGG AGTTCAAAGA CTACTATGCC GTCCTTGGCG TCCCGCCCGA CGCCGACGAG
CAAACGATCA AGAAAGCGTA CCGCAAACTG GCGCGGCAGT ACCATCCCGA CGTCAACCCT
GGTGACAAAA AGGCTGAAGA GCGCTTCAAA GAGATCAATG AAGCCTACGA GGCGCTGAGC
GACCCGGAAC GCCGCCACAA GTACGATCAG TTGCGCGAAC AGTATCAGCG CTGGCAGCAG
CGCGGCGGCA GCGGCGAGTT CGACTGGGGT CCCTGGCAAA CGGCGCCGGG GCAGACAGTC
TACACCTATA CAACGGTCTC ACCGGAGGAC CTGGAAGACC TCTTCGGAGG TGAAAGTCCC
TTTTCGGACT TCTTCGGGAC GATCTTCGGT CAGCCACATG GCGCCACCCC CCGTGGACCG
CAGCGCGGGC GCGATCTTGA ACTGCCGGTT GAGATTTCGC TCGAAGAGGC GTTTTACGGC
ACGACACGCT CGCTTCAGGT AGGCACGCGG CGCATCGAGG CGAAGATTCC GGTCGGCGCG
CGCACCGGAA CCCGTGTGCG TCTTGCCGGG CAGGGGCGCC CCGGCATTGC CGGAGGTCCG
CCGGGCGATC TCTACCTGCT GATCACCGTC CTGCCGCATC CACAGTTCGA GCGCGACGGC
GATGATCTGA CCACGACCGT TTCGGTTGAT TGTTTTACCG CAATTGCCGG CGGCGAGGCG
CGCGTTCCGA CATTGGACGG TTCGGTGCTG CTCAAGATTC CGCCGCGCAC GCAGGCAGAT
CAGGTCTTCC GACTGCGGGG CAAAGGCATG CCACGCCTCG AACGCCCGAC CGAACGCGGC
GATCTCTTTG CCCGGGTGAA ACTGGTGTTG CCCGAAACGT TGAGTGATGC TGACGTCGAA
ACGATTCGCA CACTGGCGCG CGAGCGGAGC GCCCGAAAAA AAGGGTGA
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| Protein sequence | MPMEFKDYYA VLGVPPDADE QTIKKAYRKL ARQYHPDVNP GDKKAEERFK EINEAYEALS
DPERRHKYDQ LREQYQRWQQ RGGSGEFDWG PWQTAPGQTV YTYTTVSPED LEDLFGGESP
FSDFFGTIFG QPHGATPRGP QRGRDLELPV EISLEEAFYG TTRSLQVGTR RIEAKIPVGA
RTGTRVRLAG QGRPGIAGGP PGDLYLLITV LPHPQFERDG DDLTTTVSVD CFTAIAGGEA
RVPTLDGSVL LKIPPRTQAD QVFRLRGKGM PRLERPTERG DLFARVKLVL PETLSDADVE
TIRTLARERS ARKKG
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