Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2938 |
Symbol | |
ID | 5540428 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 3813729 |
End bp | 3814124 |
Gene Length | 396 bp |
Protein Length | 131 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640895058 |
Product | thioesterase superfamily protein |
Protein accession | YP_001433017 |
Protein GI | 156742888 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1607] Acyl-CoA hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00161 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0050577 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCGCTG CCGATCGCGT CGAGACGCGT ATGGTCTTTC CGGTGTTCCC CATGAACACC AACCACTACC GGACCCTCTT CGGCGGCACG GCGGTCGCCT GGATCGACCA GGCGGCGTTC ATTTGCGCCA CGCGCTGGTG TCGGCGCAAG GTCGTGACGG TGCGGATCAG CGAGGTCAAC TTCCACCACC CGGTGCGTGA AGGGTCGATT GTCGAGGTGA TCGCCCGTCT GGTCGGTACC GGACGCAGTT CAATGCGTAT CGCTGTCGAT GTCTGGTGGG AGCCGATGGA CCACAACGAA CGGGTGCTGG TGTGTCAGGC GGAATGCGTG CTCGTCGCCG TCGACGAGCA GAATCGTCCG GTGACGGTGC CGCCGCTGAC GGAGACAATG TCATGA
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Protein sequence | MSAADRVETR MVFPVFPMNT NHYRTLFGGT AVAWIDQAAF ICATRWCRRK VVTVRISEVN FHHPVREGSI VEVIARLVGT GRSSMRIAVD VWWEPMDHNE RVLVCQAECV LVAVDEQNRP VTVPPLTETM S
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