| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2925 |
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| Symbol | |
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| ID | 5540415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3788091 |
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| End bp | 3789488 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640895046 |
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| Product | hypothetical protein |
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| Protein accession | YP_001433005 |
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| Protein GI | 156742876 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.221134 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.412302 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACAGA CCGAACATTC AAACATCCTC GTTGAGAGCC TCCTGATATT GCTCCTTATC
ATCGCCAACG GCTTTTTTGC CGCATCGGAG ATTGCGATCG TCTCCGCGCG CAAAGGGCGG
CTCGAGCAGC AGGCGGAACG GGGCGACGGC GGCGCACGCG CCGCGCTCAC GCTGCGGGAA
GCGCCGAGTC GGTTCCTTTC GACGGTGCAG GTTGGCATTA CCCTCTTTGG CACATTTGCA
GCAGTCTTCG GCGGTGCGAG CGTCGTGCGC GTCGTCAATG CATGGTTGCA GAACATTCCT
GCGCTGGCGC CCTATGCCGG CGCGCTGGCG CCGGCCATTG TAGCATTGGG CATCAGTTAT
CTCTCGCTCA TTGTCGGCGA GTTGGTTCCC AAGCGTCTGG CGTTGCAGAA TGCCGAACGA
GTGGCTGCGA TAGTCGCTCC GCTCATGGTG TTGCTGGCGC GTATTGCATT GCCAGCAGTC
ATGTTTCTGA CCTTCTCGAC CGACGTTGTC CTGCGGTTGC TCGGTCGTCA TAACGTGGCA
GAAATGCCCG TCACCGAGGA CGACATTATG GCGCTGGTGC GTGAGGGCGC TGCTGAAGGT
ACGGTAGCGG ATTCCGAGCA AACCGTGATC CATAATGTCT TTAAGTTCAG CGATCGGACG
GTGCGCTCGC TGATGACGCC GCGCACGCAG ATCACTGCCA TCGACATCGA CACGCCGTTG
GATGAAGCAT TGAAAATTGC CACCGAATCC GGCTATTCAC GCATTCCGGT GTACGAAGGG
ACGCTCGATC ATGTCATCGG CATCCTGTAC GTCAAAGACT TGCTGGCATT CTGGGGGCAA
TGTGAGCCGC CGAATTTGCG GGAGTTGTTG CGCCCGCCAA TGTATATCAT CGAAAGTCAA
CGCGCTGCGC AGGCGTTCCA GCAACTGAAG CAGAACCGCC ATGCGCTTGC CGTCGTCCTC
GATGAATATG GTCAGGTTGC CGGTGTGATC ACGATTGAGG ATATGCTCGA AGAATTGGTT
GGCGATATTT CGGACGAGTA CGATGAGATC AGCGAGTCGA TCGTGCAACG TGACGACGGC
AGTTATCTGG TCGATGGACT GACGCCGTTC GCCGATCTTC ACGAACGACT TGCCCTGCCT
CCCGCCGATG ATCTGGTGCG TGAGCACGGT TTCGAGACGC TTGCCGGTTT CGTGCTCGCG
CTGCTCGGTC GTATTCCGAA TGCTGGCGAC AGCGTCAAAT GGGAAGGCTA TACGTTCGAG
GTCGTCGATA TGGATGGACG ACGAATCGAC AAGGTCTTGA TCATTCCGCC GCGTCCGTCA
GTCGATCAAA CGCGCCATGT CCTGGCGACT CGCGCCATCG CGCCGAAGAC GCGCCAGAGT
AACGCTGAAG CAGCCTGA
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| Protein sequence | MEQTEHSNIL VESLLILLLI IANGFFAASE IAIVSARKGR LEQQAERGDG GARAALTLRE
APSRFLSTVQ VGITLFGTFA AVFGGASVVR VVNAWLQNIP ALAPYAGALA PAIVALGISY
LSLIVGELVP KRLALQNAER VAAIVAPLMV LLARIALPAV MFLTFSTDVV LRLLGRHNVA
EMPVTEDDIM ALVREGAAEG TVADSEQTVI HNVFKFSDRT VRSLMTPRTQ ITAIDIDTPL
DEALKIATES GYSRIPVYEG TLDHVIGILY VKDLLAFWGQ CEPPNLRELL RPPMYIIESQ
RAAQAFQQLK QNRHALAVVL DEYGQVAGVI TIEDMLEELV GDISDEYDEI SESIVQRDDG
SYLVDGLTPF ADLHERLALP PADDLVREHG FETLAGFVLA LLGRIPNAGD SVKWEGYTFE
VVDMDGRRID KVLIIPPRPS VDQTRHVLAT RAIAPKTRQS NAEAA
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