Gene Rcas_2923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2923 
Symbol 
ID5540413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3785696 
End bp3786409 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content62% 
IMG OID640895044 
Productmolybdopterin converting factor, subunit 1 
Protein accessionYP_001433003 
Protein GI156742874 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0314] Molybdopterin converting factor, large subunit
[COG1977] Molybdopterin converting factor, small subunit 
TIGRFAM ID[TIGR01682] molybdopterin converting factor, subunit 1, non-archaeal
[TIGR01687] MoaD family protein, archaeal 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.253971 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.914332 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAGA GCATCACGAT CACCGTTCGC TACTTTGCGG CACACCGTGA GATCACCGGT 
TGCAGTGACG AAACGCTCGT CCTCGCGCCT GGCACGACCG TCGGCGCGCT ATGGGAGATG
CTAACCGAAC GCTACCCGCG GCTTGCCGGG TATAGCGGGC GGTTGCTGTT TGCAGTCAAT
CAGGAATTCG CTGCGTCCGA TCACACCCTG CGCGACGGCG ATGAAGTCGC CTTTATTCCG
CCGGTGAGCG GCGGCGCGCT CCAACCGTTC GTTGTCACTC CCGACCCGCT TGATCCCGCG
CCGCTCGTTG CGCTGGTACA GGCGCCCGAT ATGGGCGCAA TCGTCACATT CGCCGGCGTG
GCGCGCGACA ACTTTGGCGG GCGCAAAACC GCCTTCCTGG AATATGAGGC GTATCCCGGT
ATGGCGGAAG CGGTGCTCGC ACAGATTGCC GCCGAAGCGC GCGCGCGCTG GCAGACCGGT
GCGATCGCGG TGCATCATCG GATTGGGCGC CTGGAGATTG GCGAAACGGC AGTTCTGGTA
GTGGTCGCCG CGCCGCATCG CCGTGAAGCC TTTGCAGCCG CCGAATGGAT TATGGACCGC
ATCAAAGAAG TTGCGCCGAT CTGGAAAAAG GAACATTGGG CGGATGGCGA CGCCGAATGG
GTTGGCGACG AGAAGGAGCG TAAGCAGAAG GCGCCTCAGC GTTCGACAAT ATAA
 
Protein sequence
MTKSITITVR YFAAHREITG CSDETLVLAP GTTVGALWEM LTERYPRLAG YSGRLLFAVN 
QEFAASDHTL RDGDEVAFIP PVSGGALQPF VVTPDPLDPA PLVALVQAPD MGAIVTFAGV
ARDNFGGRKT AFLEYEAYPG MAEAVLAQIA AEARARWQTG AIAVHHRIGR LEIGETAVLV
VVAAPHRREA FAAAEWIMDR IKEVAPIWKK EHWADGDAEW VGDEKERKQK APQRSTI