| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2919 |
|---|
| Symbol | hisH |
|---|
| ID | 5540409 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | + |
|---|
| Start bp | 3782337 |
|---|
| End bp | 3782960 |
|---|
| Gene Length | 624 bp |
|---|
| Protein Length | 207 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640895040 |
|---|
| Product | imidazole glycerol phosphate synthase subunit HisH |
|---|
| Protein accession | YP_001432999 |
|---|
| Protein GI | 156742870 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0118] Glutamine amidotransferase |
|---|
| TIGRFAM ID | [TIGR01855] imidazole glycerol phosphate synthase, glutamine amidotransferase subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATCG CAGTGATCGA CTATGGCGCC GGAAATCTGC GCAGTGTCGT GCGCGCTCTG
CAACGGATCG GCGCGCCGCT CGAGGTGACC AGCAATCCGA ATGCGGTGAT TGCTGCGCCT
GCCGTGGTAC TGCCCGGCGT TGGCGCGACC CGCGACACAA TGCAGAGCCT GGAACAGTTG
GACCTCGTTG CTGCCATTCA CGAGGTCATC GCGCGCGGGA CACCGTTCCT CGGCATTTGC
GTCGGTATGC AGGTGCTCTG TGATCAGAGC GAGGAGTTCG GTCCGCATCC CTGCCTCGGC
ATCGTTGGCG GCGCGGTGCG CCGCCTGCCA TCGCATCTGA AAGTACCGCA GATTGGATGG
AACCAGGTGT GCTATATGCC GCACGCAGCG CGGCATCCGC TCTTCGCCGG AATCGACGAC
GGCAGTGATT TCTATTTCGT TCACTCCTAC TACTGCGATC TGACTGATGA GCACGATATC
GCTGCCACAA CGACGTATGG GCTTGCTTTC CCCAGCGTGC TCATTCGCAG AAATCTGGCA
GCCGTGCAGT TCCATCCCGA AAAGAGCGGT CATTATGGGC TGCAACTCCT GACGAACTTC
ATCAGATGGG CGGGTGTGGC ATAA
|
|---|
| Protein sequence | MSIAVIDYGA GNLRSVVRAL QRIGAPLEVT SNPNAVIAAP AVVLPGVGAT RDTMQSLEQL
DLVAAIHEVI ARGTPFLGIC VGMQVLCDQS EEFGPHPCLG IVGGAVRRLP SHLKVPQIGW
NQVCYMPHAA RHPLFAGIDD GSDFYFVHSY YCDLTDEHDI AATTTYGLAF PSVLIRRNLA
AVQFHPEKSG HYGLQLLTNF IRWAGVA
|
|---|
| |