Gene Rcas_2902 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2902 
Symbol 
ID5540392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3762847 
End bp3764721 
Gene Length1875 bp 
Protein Length624 aa 
Translation table11 
GC content60% 
IMG OID640895023 
Producthypothetical protein 
Protein accessionYP_001432982 
Protein GI156742853 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.779759 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGTCG AAAAAGTGCA TCGATACCCG CGCCATTTTA CTGTTACCAT CGAAATATTG 
TCGGCCATCA CCGTTCTTCT TGCTACGGCG CTGCTGGGGC GCGACCTGCT GCGCCTGCTC
TGGTCGACCT ATACCCTCGA CACTGCCCTG TTTGCCCGTT TTCCCTGGCT CACCGATCTG
GTCCTGCTCA TTTCCGACGC CAATACGCCT CCGCCATCCG GTCTCGCGGA TCTGTTGCCT
GCGCTCGGGT GGATGGCGTT GGCGCTGGCA ACCGCCCTTC TTCTTCGGAA CAGTATGCCG
ACGGTACGCA CCAGTGCGCG CGGCATGCTG GTAGCGTTTG TCAACGACTG GCTGCCGGTA
CCATGGGAAA ATATTCGCGC AATCAAAGTG ACCGAGTCCG GTGATCGCTA CGTGCTGCTG
GTTGAAACCG ACCGCGGATG GCTTACCGGA TGGCATCGCT GGTACAGTTT CATCTATCGT
CTTGGATTTC GCCCGGCGTT TCTGATTACG TCGCAGATCA GCGACTTTGA TGAACTGGTC
AAGACGTTGC TGAGCGAAGC GGATCGCGCA GCGCGCACGC TGGCGACAGC ACGACGCATC
AAATTGCAGG AAGACGCCAG TTCACCATTG TTCCGGCTTC TGCTCAGCCC GACGGCGTTT
TTTACGCAAC GCGCGCCGCG AAGCGATGCA CCGCCTGCTG TGGCAGGCAT TTCCGGCGAT
GTTGTGATTG GCCAGTATCC CCGACGTATC CGCGCAACAC TGACCTGGAC TGCGGCGCTC
ATCGCCGGTG CGGCTATCCT GCGGTACCTG ACACTCGCGC TGACTTTCCT GGCGATTACT
TTCCCCTGGG TGCGTTCGCT ACCGATCATC GATCAACTCG ATCTGCGATT GCTTCCCGCG
CCCTGGTGGC TGCTCATCGA GGCGCACATT GTGCTCTTGT TCCTGATCGG CGTGGCATCG
GTCATCTATC ATGCGCTGCC CACCGTAGAA GCGCGCAGTG AAGGGTTGAT CGTTCATCGA
TGGCGCGGCA GGACGCTTGT GCCCTGGTCA CGCCTGCGGG TCATGAAGGT CACCGAGTTT
TCGGAAACCA GCCAGATAGT GCTGATCCAG GTTGCCGGCG GATTGCCGCT GGATACCCGC
TTCGTCAGTA TGGTGTACGA TGGCAGCCTG TCGCCGGGCA TTCTGATCAC CTCGGCGATC
GGCAATGCCG ACGCATTGCT GCAACGCATC GCGCTGGAAG CCATGCGATA CCATGAGGCG
ACCGACGATA CCGCGACAGC CCCGTTCCAG AGTGATGCTC GTTCGGACCT TTTGTTGTTA
AGTGTGCAGT CGAGCAGGGC GGTCAACCAT CTGGTCGAAG AGTTGCGCAA CGATCCCGAT
ACCCAGGGGT TCACCACCCG ACGATTCTTG CGCCTTCTGC CCACTGCCCT TGGGCTGGCC
TCATTCCCTG CGCTGATATT GTTCGCCGAT CGTTCGTTCG TTCAGCATAT TCTCCCGGAT
GGACGCCTGC TGGGAGCAAT GGTTGTGCTG CTGCTGCTGG CGCTGCTCGA ATGGCCGCTG
GTGTCGCTTG CCGCCGTTGC ACTCGATGAG ATGAGCGGCA GCAGCGAGGA CGGCATGCGC
CCCCTCTATC TCTATCCTCA GACTCAACAA CCGCGCCTGT TCCTCATGCT GGCTGCGCTG
ATCGCCTTGC TGCTCGGCGC GCAACCGCTG GCGGCACTCC TCTGGTTGGG CGCCATCGGC
TGGTCGTTCT GGCTGGCGGC AGGTTTGTGG AGCGCATTGT ACGACTGGCG CGGCGGGCAA
TTGATCGGCG GAGGGTTGCT CCCGGTCGCC TTTCAGTTGC TTCTGCTGAT CGGGTACCTG
GTGGTGCGGG TGTAG
 
Protein sequence
MNVEKVHRYP RHFTVTIEIL SAITVLLATA LLGRDLLRLL WSTYTLDTAL FARFPWLTDL 
VLLISDANTP PPSGLADLLP ALGWMALALA TALLLRNSMP TVRTSARGML VAFVNDWLPV
PWENIRAIKV TESGDRYVLL VETDRGWLTG WHRWYSFIYR LGFRPAFLIT SQISDFDELV
KTLLSEADRA ARTLATARRI KLQEDASSPL FRLLLSPTAF FTQRAPRSDA PPAVAGISGD
VVIGQYPRRI RATLTWTAAL IAGAAILRYL TLALTFLAIT FPWVRSLPII DQLDLRLLPA
PWWLLIEAHI VLLFLIGVAS VIYHALPTVE ARSEGLIVHR WRGRTLVPWS RLRVMKVTEF
SETSQIVLIQ VAGGLPLDTR FVSMVYDGSL SPGILITSAI GNADALLQRI ALEAMRYHEA
TDDTATAPFQ SDARSDLLLL SVQSSRAVNH LVEELRNDPD TQGFTTRRFL RLLPTALGLA
SFPALILFAD RSFVQHILPD GRLLGAMVVL LLLALLEWPL VSLAAVALDE MSGSSEDGMR
PLYLYPQTQQ PRLFLMLAAL IALLLGAQPL AALLWLGAIG WSFWLAAGLW SALYDWRGGQ
LIGGGLLPVA FQLLLLIGYL VVRV