| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2858 |
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| Symbol | trpC |
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| ID | 5540347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3710885 |
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| End bp | 3711694 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640894985 |
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| Product | indole-3-glycerol-phosphate synthase |
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| Protein accession | YP_001432945 |
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| Protein GI | 156742816 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0134] Indole-3-glycerol phosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATACAA TGCTCAACCG CATTCTGGCG CACAAACGCA TCGAAGTCGA GCGACAGCGC
ATCAAGACGC CATACGATCA AATGCGCACC CGTGCTGAAA CGGCGCCGCC GCCGCGCGAC
TTTGGCGCTG CGCTGCGCGC CCATCATCCT ATCGCGCTGA TTGCCGAAGT CAAAAAAGCG
TCACCGTCGA AAGGGGTGCT AATCGAAAAC TTCGATCCAC TGGCGCTGGC GCGGACCTAC
GCTAGTAACG GCGCCGCCGC CATCTCGGTG TTGACCGACG TCCGCTTCTT CCAGGGTCAT
CTGAAGTACA TAGAAGGAAT CCGCGCCCTG TTCGACCGGG GCGCTGCGCC ACCGTTGCCG
CTGCTGCGCA AAGACTTCAT GATCGACCCC TATCAGATCG TGGAAGCGCG CGCCTACGGC
GCCGACGCCG TGCTGCTGAT CGTCGCCGCG CTCGACGATG AGACGCTGGC GGCGTTGCTG
GCGCTGGCCG GCGACCTTGG TATGCAGGCG CTCGTCGAAG TTCACAATGC AGACGAACTC
CGCCGCGCCC TGGCGGTTGG CGCGCGCATC ATTGGCGTCA ACAACCGCGA TTTGCACAGT
TTCACAACGA CCCTGGAAAC CACGCGCCAC CTTGCGGCGC TTCTTCCGTC AGAAAACCGA
CCGCTACTGG TCAGCGAAAG CGGGATATTC ACCGCCGATC ACGTTGCGTT GGTGCGCTCC
TGGGGCGTCG ATGCCGTCCT CGTTGGCGAG GCGCTGGTCA CTGCTCCCGA TATTGCCGGC
AAAGTGCGTG AACTGGGAGG ACGCCTGTGA
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| Protein sequence | MDTMLNRILA HKRIEVERQR IKTPYDQMRT RAETAPPPRD FGAALRAHHP IALIAEVKKA
SPSKGVLIEN FDPLALARTY ASNGAAAISV LTDVRFFQGH LKYIEGIRAL FDRGAAPPLP
LLRKDFMIDP YQIVEARAYG ADAVLLIVAA LDDETLAALL ALAGDLGMQA LVEVHNADEL
RRALAVGARI IGVNNRDLHS FTTTLETTRH LAALLPSENR PLLVSESGIF TADHVALVRS
WGVDAVLVGE ALVTAPDIAG KVRELGGRL
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