| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2841 |
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| Symbol | |
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| ID | 5540330 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3683137 |
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| End bp | 3685416 |
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| Gene Length | 2280 bp |
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| Protein Length | 759 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640894970 |
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| Product | polymorphic outer membrane protein |
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| Protein accession | YP_001432930 |
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| Protein GI | 156742801 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01376] Chlamydial polymorphic outer membrane protein repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCATT CCAGAGCATT CTCCCTTGCG ACGATCTTTT TCGTGATCAC GCTCGCCGCA
GGCTGGCTGC TCTCCGCACC CTCTAGTCGC GCGGCGACAT TCACGATCCC ATGCGGCGAT
GTGACGGCGC TTATCACCGC TATCACCACT GCCAATAGCA ATAATCAGCC TGACACGATC
GCACTCGCTG CCGGCTGCAC CTATTCACTG ACGACGGTTG ACAATACCGT CGGTGGATCG
GCAAATGGAT TGCCGGCGAT CATCATCGAT AGCGGCAACC CGACGAACAG CCTGACGATC
AACGGCAACG GCGCAACGAT TGAGCGCGCG GCGGGAAGTC CGTCGTTTCG CTTGCTGTAT
CTCACCAACG TTGCTGTGAC GATCAACGAC CTGACCTTCC GCAACGGATT TGCCGAGGAT
GACGAAGGTG GCGCAATGCG GGCGCGCAGC CCCGATCTAA CGCTCAATCG CGTCACCTTC
GAGGGCAACC GCGCGACGTA TGACGGCGGC GCGCTTGTTG CGCGCGACTC TAACCTGACG
CTCAATCGCG TCACCTTTGA GAGCAATCGC GCAGGGTCCG ATGGCGGCGC GTTGTACACG
GTTAGCGTGA TGGCGAACCT ATCAGACAGC ATCTTTCGCA ACAATCAGTC GGACGCGAAC
GGCGGCGCTA TCGCTTTTCG CGTCGACGGA CCCGGACAGG CGACGATCAA AGGTTCGACC
TTCAGCAACA ATCAGGCAGC CAGCGACGGC GGCGCCATTG CTGCGTTCCA CGAGATAACC
GTTCAAAACA GCACATTCAG CAACAATCAG GCAGACGGCG ACGGCGGCGC GGTATTGTCG
AACGAAAGCG CCGTTGTTGC TTACACTACG ATCACCGGCA CGCAAACCGG CGGCGACGGG
GCACTGAACG GCAGCATCAC CCTGCGCAGC GCCCTGGTCG CCGGCAATAC CGACACATCT
ACATCACCGG GCAACTACCC CGACATTGCC GGTTCTATCG CCAGTGACGG CTACAACCTG
ATCGGAAATG TCGGCGATTA TGATTTCTCC GCGAACACCA CCGGCGATCA GTATGGCGAT
CCCAATGGAA CGACCATACC AAACAGCGGC GCGGTCGAGT CGCCGACGCC AATTGACCCG
TTGCTCGCGC CGCTCGCCAA CAATGGCGGT CCCACACCGA CGCATGCGCT GCTGGCAGGT
TCACCCGCAC TCAACCGCAT TCTGGGAGGG ACCAATGACT GCGGCGTCGC CATCGCCATC
GATCAGCGCG GCATTTCCCG ACCGCAGGAC GGCGCCTGCG ACGTTGGCGC ATTCGAGGCG
ATACCTGCGC CCGAAATCGT GGTGTACAAC GGTCCTGACA CGAGCAGCCC GGAACTGACG
AACAACCAGA CCACGGCTGT GGACTTCGGC GCCACGACAG TCGGCGCGCC CATCAGTCGC
GTGTTCGCCA TCCGCAATAC GGGAACCGCG CCGCTGACGC TTGGCGCGCT GAGCCTCCCA
TCCGGCTTTG CAGTCGTCGG GGCGTTCCCC ACCGGACCGG TCGCTCCCGG CGCAACGGTC
ACATTTACGG TGCAACTGAC GGCGGTTGCC GCCGGGGTGT TCAGCGGCAC GCTCTCCTTC
GTCAACGGCG ACGCCGATGA GAACCCGTTT CAGTTCCCGA TCCGCGGCGT TGTGACGGCT
GCGACGCCAA CGCTTCAGCA GACATACCTG CCGCTCATTG TGCAACCAGG GCAACCCGAC
CTGATCATCG CCGGCATCGA GATCATTCCC AACCAGACGA GTTTTACAGC CGGTCAACCG
GTGGAGATTC GGGTGACGGT GAAGAATGTC GGCACTGCGC CGGCAGGATC ATTCTGGGTC
GATCTCTACC TCAACCCGGA CCGCCCGCCG CAGATCAACG ACCTCTGGCA CGACCGTTGC
GCGCTACGCC CATGTTTCGG CGTCGCCTGG GGTGTGACAC AAATCCTGCA ACCGGGAGAG
CAGATCACGC TCAGCACCGG CGGCGGGTAT GATCCGCTCC GCTCCTACTG GCTGGGGTGG
CTGGCAAACG GCACAACGAC GATCTACGCC CTGGCGGATA GCTGGAACAC GAGCGGCGCG
AGCGGCGCCG TGCGCGAGTC GGACGAAACG AACAACCGTG GCGTGCGCGA CGGTCTGACT
GTTAGTGGCG CAAACCCGCC AGCCCCGCCG TGGAAGCCGT CCGTGCTGAC AGGCGCAGCG
CAGGAGTCGC TTCTGCCCGA ACGACCGGCG TATGATGGGA CGTTCCGCGC TGAACGTTGA
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| Protein sequence | MHHSRAFSLA TIFFVITLAA GWLLSAPSSR AATFTIPCGD VTALITAITT ANSNNQPDTI
ALAAGCTYSL TTVDNTVGGS ANGLPAIIID SGNPTNSLTI NGNGATIERA AGSPSFRLLY
LTNVAVTIND LTFRNGFAED DEGGAMRARS PDLTLNRVTF EGNRATYDGG ALVARDSNLT
LNRVTFESNR AGSDGGALYT VSVMANLSDS IFRNNQSDAN GGAIAFRVDG PGQATIKGST
FSNNQAASDG GAIAAFHEIT VQNSTFSNNQ ADGDGGAVLS NESAVVAYTT ITGTQTGGDG
ALNGSITLRS ALVAGNTDTS TSPGNYPDIA GSIASDGYNL IGNVGDYDFS ANTTGDQYGD
PNGTTIPNSG AVESPTPIDP LLAPLANNGG PTPTHALLAG SPALNRILGG TNDCGVAIAI
DQRGISRPQD GACDVGAFEA IPAPEIVVYN GPDTSSPELT NNQTTAVDFG ATTVGAPISR
VFAIRNTGTA PLTLGALSLP SGFAVVGAFP TGPVAPGATV TFTVQLTAVA AGVFSGTLSF
VNGDADENPF QFPIRGVVTA ATPTLQQTYL PLIVQPGQPD LIIAGIEIIP NQTSFTAGQP
VEIRVTVKNV GTAPAGSFWV DLYLNPDRPP QINDLWHDRC ALRPCFGVAW GVTQILQPGE
QITLSTGGGY DPLRSYWLGW LANGTTTIYA LADSWNTSGA SGAVRESDET NNRGVRDGLT
VSGANPPAPP WKPSVLTGAA QESLLPERPA YDGTFRAER
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