| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2789 |
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| Symbol | |
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| ID | 5540276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3607080 |
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| End bp | 3608051 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640894916 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_001432878 |
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| Protein GI | 156742749 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00377] anti-anti-sigma factor |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAGA GCAATGCAGG CAGCCCGGTT TCTCAAACTC ACGAATCGGA TGCGCATATG
CTGGAACTTG AGCGGCGAAT CAGCGATCTC CAACAGCAGA TGGCGCGTGA TGCGGCAGAA
ATGGAACGTT TGCGCATCCG GGCAGACAGC AATGAGCGTG CTGCGGGCAT TCTGCGCGCA
CTTGCCGACA ACATTCCAGA TTGGGTGTTC GTCAAGGATC GCAACCATCG CTATCGCTTC
GTCAACAAGG CGTATGCGGT ATCGCTCCAG ATGCATCCCG ACGACATGCT GGGAAAGGAC
GACATCGAAC TGGGATTTCC AGAGTACAAT GTCAAGGGCG ATCCGGAACG CGGCATTCGC
GGATTCTGGG CTGATGATCG TCAGGTGATG GAAAGCGGCG AACCCCTGAT CATTCCGCGC
GATGTTGCAA CGCTCAATGG CAAAGAGCAT ATCTTCTTCA CATCGAAACT TCCACTCAAG
GATGGGGACC GGCATATCTG GGGGGTGCTC GTCCTGTGCC ACGATGTGAC CGATCAGCAG
GAGGCATTGG AAGCAAAGCG CCAGAGCATG GAGCACGAGG CGCTGATCGC AGCGCAACAG
GCGGCGATTC GTGAGTTGTC CACGCCGCTC ATTCCCGTGG CGGATGGCGT GGTCGTTATG
CCGATCGTCG GAACGGTCGA AAGTACGCGC GCCTTGCAGA TCATGGAAAC CCTGCTGACC
GGCATTGCGC AGTACCGTGC GCATACTGCA CTGCTGGACA TTACCGGGGT GAAGGTCATC
GACACGCAGA TTGCGGCAGC GCTGGTGCGC GCGGCGCAGT CGGCACGGCT GCTGGGGACG
GACGTTATCC TGACCGGCAT CAGCCCTGAA GTCGCGCAGA CGCTGGTGCA TATCGGCGCC
GATCTGAGTG CGCTGAAAAC GCACAGTTCG TTGCAACGCG GTATCGCGTA TGCGCTCCGG
CGGCAACGGT AG
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| Protein sequence | MTQSNAGSPV SQTHESDAHM LELERRISDL QQQMARDAAE MERLRIRADS NERAAGILRA
LADNIPDWVF VKDRNHRYRF VNKAYAVSLQ MHPDDMLGKD DIELGFPEYN VKGDPERGIR
GFWADDRQVM ESGEPLIIPR DVATLNGKEH IFFTSKLPLK DGDRHIWGVL VLCHDVTDQQ
EALEAKRQSM EHEALIAAQQ AAIRELSTPL IPVADGVVVM PIVGTVESTR ALQIMETLLT
GIAQYRAHTA LLDITGVKVI DTQIAAALVR AAQSARLLGT DVILTGISPE VAQTLVHIGA
DLSALKTHSS LQRGIAYALR RQR
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