Gene Rcas_2746 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2746 
Symbol 
ID5540232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3553831 
End bp3554361 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content59% 
IMG OID640894872 
Productphosphodiesterase 
Protein accessionYP_001432835 
Protein GI156742706 
COG category[R] General function prediction only 
COG ID[COG0622] Predicted phosphoesterase 
TIGRFAM ID[TIGR00040] phosphoesterase, MJ0936 family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCG CCATCGTCTC GGACATCCAC GACCACATTT CGCGCCTGGC AACGGCGCTA 
GAGCGCGTGC GCGACGCGGA TGCACTGATC TGCTGCGGCG ATCTCTGCTC ACCGTTCATT
ATGCGGCAGT TAGGTGAGGG CTTTGCCGGT CCGATCCACA TCGTGTTCGG CAACAACGAC
GGTGATCTGT TTCGTCTGAC CGCTACCGCA GCGCAGTTTC CGGCAATCAC GCTGCACGGC
GCGTTTGCCG ATCTCGACCT CAATGGATTG CGGGTGGCGG TGACGCATTA CCCGGAGATT
GCTATGCCGC TGCTCGAAAG TGGCCGCTAT GGTCTCGTGT GCTGTGGGCA CAATCATCAG
TACACCGTCG TTCAGCGTGG TGCTGTAACA CTCGTTAACC CTGGCGAGGT GATGGGCGAA
CTCTATGGCG CTGCCACCTG CGCCGTGTAT GACAGCGAAA CCGGTGATGT TACACCAATT
ACGATTGACG ATGCCGCATT CTTGTCATTC CGAGCGCAGC GAGGAATCTG A
 
Protein sequence
MRIAIVSDIH DHISRLATAL ERVRDADALI CCGDLCSPFI MRQLGEGFAG PIHIVFGNND 
GDLFRLTATA AQFPAITLHG AFADLDLNGL RVAVTHYPEI AMPLLESGRY GLVCCGHNHQ
YTVVQRGAVT LVNPGEVMGE LYGAATCAVY DSETGDVTPI TIDDAAFLSF RAQRGI