Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2746 |
Symbol | |
ID | 5540232 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 3553831 |
End bp | 3554361 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640894872 |
Product | phosphodiesterase |
Protein accession | YP_001432835 |
Protein GI | 156742706 |
COG category | [R] General function prediction only |
COG ID | [COG0622] Predicted phosphoesterase |
TIGRFAM ID | [TIGR00040] phosphoesterase, MJ0936 family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCATCG CCATCGTCTC GGACATCCAC GACCACATTT CGCGCCTGGC AACGGCGCTA GAGCGCGTGC GCGACGCGGA TGCACTGATC TGCTGCGGCG ATCTCTGCTC ACCGTTCATT ATGCGGCAGT TAGGTGAGGG CTTTGCCGGT CCGATCCACA TCGTGTTCGG CAACAACGAC GGTGATCTGT TTCGTCTGAC CGCTACCGCA GCGCAGTTTC CGGCAATCAC GCTGCACGGC GCGTTTGCCG ATCTCGACCT CAATGGATTG CGGGTGGCGG TGACGCATTA CCCGGAGATT GCTATGCCGC TGCTCGAAAG TGGCCGCTAT GGTCTCGTGT GCTGTGGGCA CAATCATCAG TACACCGTCG TTCAGCGTGG TGCTGTAACA CTCGTTAACC CTGGCGAGGT GATGGGCGAA CTCTATGGCG CTGCCACCTG CGCCGTGTAT GACAGCGAAA CCGGTGATGT TACACCAATT ACGATTGACG ATGCCGCATT CTTGTCATTC CGAGCGCAGC GAGGAATCTG A
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Protein sequence | MRIAIVSDIH DHISRLATAL ERVRDADALI CCGDLCSPFI MRQLGEGFAG PIHIVFGNND GDLFRLTATA AQFPAITLHG AFADLDLNGL RVAVTHYPEI AMPLLESGRY GLVCCGHNHQ YTVVQRGAVT LVNPGEVMGE LYGAATCAVY DSETGDVTPI TIDDAAFLSF RAQRGI
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