Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2710 |
Symbol | |
ID | 5540196 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 3498116 |
End bp | 3499282 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640894836 |
Product | cyclic nucleotide-binding protein |
Protein accession | YP_001432799 |
Protein GI | 156742670 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTCAAAG GCTGGTTCCA GCGTACAACA GCAACTGTTG CTGCACATGT TGAGGGTGCA TACCGGAACG GCAACACAAC CCTCATCGAA CTGCGCAACG TTAGCAAGAC CTTCGAAACA GCAGCAGGAC CCTTCACCGC ACTCGATTCG ATCACACTCA ACGTGGATCG CGGCGAGTTT GTGGCGATTA TCGGCAAGTC GGGCAGCGGC AAATCGACGC TTATGAACAT GATCTCTGGC ATCGACCGAC CAACATCGGG CGAGGTGTTC ATTGGCGATA CCGCCGTCCA TACCCTGAAC GAGAGCGAAA TGGCCGTCTG GCGCGGGCGC AACGTCGGCA TCGTCTTTCA ATTCTTCCAG TTGCTCCCGG CGCTCTCGTT GGTCGAAAAC GTTATGCTGC CGATGGACTT CTGCGCCATG TTTACGCCGC GCGAACGGCA CGAACGGGCA ATGATGCTGC TCGATCAGGT TGGCATGGCC GATCAGGCGC ACAAACTTCC CGCCGCTATC TCTGGCGGTC AACAGCAGCG CGTTGCCATT GCCCGCGCCC TTGCCAACAA TCCGCCGATC ATTCTTGCTG ATGAGCCAAC CGGCAACCTC GACTCAAAGA CGGCGCAACA GGTGTTTGCC CTGTTCGAGC GTCTGGTCGA TCAGGGCAAA ACCATTCTGA TGGTCACCCA CGACAGCGAC ATGGCGCGGC GGGTCAGTCG GGCGGTCATT CTTGCCGATG GACGGATTGT TAACGAGTAT GTCGCGCAGG CGCTTTCCAC TCTAACACTC GACCAGTTGG GATGGGTCAT GCGTCACGCT GAAACTCACA CCTATGCCCC TGGCGCCATT ATTCTCAAAC AGGGCGAACC CGCCGACAAC TTCTATATCA TCACCAAAGG CGAGGTCGAG GTCTTCATCG ATCATCCTGA CGGCGGCGAG ATCATCGTCA ACCACTTGAG CAGTGGCGCC TACTTTGGTG AAATCGGGCT GCTGCGCGAA GGGTGTCGCA CTGCCAGTGT GCGCGCCAGT TTTGTCACCG GCTGCGAAGT CGCCGTGCTC GACCGACAGG AGTTTCACAC GTTGCTGGCA GAGTCGGAAA CGACTCGCCA CGTCATTGAT CGGGTTGCAC ACGAACGTGA TGCTCACACT CGCGCGGCAG AAGCCAGCGC GTTGTAG
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Protein sequence | MFKGWFQRTT ATVAAHVEGA YRNGNTTLIE LRNVSKTFET AAGPFTALDS ITLNVDRGEF VAIIGKSGSG KSTLMNMISG IDRPTSGEVF IGDTAVHTLN ESEMAVWRGR NVGIVFQFFQ LLPALSLVEN VMLPMDFCAM FTPRERHERA MMLLDQVGMA DQAHKLPAAI SGGQQQRVAI ARALANNPPI ILADEPTGNL DSKTAQQVFA LFERLVDQGK TILMVTHDSD MARRVSRAVI LADGRIVNEY VAQALSTLTL DQLGWVMRHA ETHTYAPGAI ILKQGEPADN FYIITKGEVE VFIDHPDGGE IIVNHLSSGA YFGEIGLLRE GCRTASVRAS FVTGCEVAVL DRQEFHTLLA ESETTRHVID RVAHERDAHT RAAEASAL
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