Gene Rcas_2681 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2681 
Symbol 
ID5540163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3463969 
End bp3464346 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content65% 
IMG OID640894803 
Producthypothetical protein 
Protein accessionYP_001432770 
Protein GI156742641 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00455306 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTCTGA TCAATTTTTC GCATCCATTG ACGGAGCAGC AACTGGCACA GATCGCCACG 
TTCGTTGGCG CGACGCCCGA GGTTCGCGCC ATTGATGCGC AGATCGACCG GGAACGACCG
CTTGCCGAGG TTGCCGTCGA ACTGGTGGAT CGCGTCGGTT TATCCCCCGA CGAGTGGCAA
ACTATTCCGC TCCTGATCAA CCCGCCGGCG CTGGCGCCGC TGGCAGTCGC CGTGCTGTCG
GAAATCCACG GGCGCGCCGG CGGCTTCCCG GCGATGGTGA ACGTTCGCCC GGTCACGGGG
ACGGTTCCCA CCAGGTATGA AGTGGCGGAG GTGCTCAACC TGCAAGCACT GCGCGAAGCG
GCGCGGAGGC GGAGGTAG
 
Protein sequence
MILINFSHPL TEQQLAQIAT FVGATPEVRA IDAQIDRERP LAEVAVELVD RVGLSPDEWQ 
TIPLLINPPA LAPLAVAVLS EIHGRAGGFP AMVNVRPVTG TVPTRYEVAE VLNLQALREA
ARRRR