Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2681 |
Symbol | |
ID | 5540163 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 3463969 |
End bp | 3464346 |
Gene Length | 378 bp |
Protein Length | 125 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640894803 |
Product | hypothetical protein |
Protein accession | YP_001432770 |
Protein GI | 156742641 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00455306 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATTCTGA TCAATTTTTC GCATCCATTG ACGGAGCAGC AACTGGCACA GATCGCCACG TTCGTTGGCG CGACGCCCGA GGTTCGCGCC ATTGATGCGC AGATCGACCG GGAACGACCG CTTGCCGAGG TTGCCGTCGA ACTGGTGGAT CGCGTCGGTT TATCCCCCGA CGAGTGGCAA ACTATTCCGC TCCTGATCAA CCCGCCGGCG CTGGCGCCGC TGGCAGTCGC CGTGCTGTCG GAAATCCACG GGCGCGCCGG CGGCTTCCCG GCGATGGTGA ACGTTCGCCC GGTCACGGGG ACGGTTCCCA CCAGGTATGA AGTGGCGGAG GTGCTCAACC TGCAAGCACT GCGCGAAGCG GCGCGGAGGC GGAGGTAG
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Protein sequence | MILINFSHPL TEQQLAQIAT FVGATPEVRA IDAQIDRERP LAEVAVELVD RVGLSPDEWQ TIPLLINPPA LAPLAVAVLS EIHGRAGGFP AMVNVRPVTG TVPTRYEVAE VLNLQALREA ARRRR
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