Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2679 |
Symbol | |
ID | 5540161 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 3462558 |
End bp | 3463007 |
Gene Length | 450 bp |
Protein Length | 149 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640894801 |
Product | hypothetical protein |
Protein accession | YP_001432768 |
Protein GI | 156742639 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0328] Ribonuclease HI |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.207946 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGACTT TGTTGCTGTT ACAGGTCGAT GGCACGCCTG GCACGATGCC GCGCGGCATT GCCGGGCTGG GGATCGTTGT CCGCAGCGCG ACCGGCGCGG TGCTGGCATG GTCGTGCGAA CGCGCTCCGG CAATGTCTAA TAACGAGGCG GAGTATCAGG CGGTCATTGC AGGGTTGATG TTCGTGATCC GGCACTATCC TGGTAGCAGG GTACGCTGCC TGACCGATAG CCGGATCGTG GTTGACCAGC TGGCGGGTCG CCACGCGGTG CGCGCTGCGG TGCTGCAACC GTTGCATATG CGCGCACAGG AACTCGTTCG TCAGCACGGT CGCGTTACAT TCCTCGCTAT CCCGCGCGAA CTCAATCGCC TGGCGGACGC GCTCGCCTGG GAAGCGCTCG ACGGTCGCGA CTGGCTGGCG TGTGCGGTCA ATCGTCATCA TGCGATGTGA
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Protein sequence | MMTLLLLQVD GTPGTMPRGI AGLGIVVRSA TGAVLAWSCE RAPAMSNNEA EYQAVIAGLM FVIRHYPGSR VRCLTDSRIV VDQLAGRHAV RAAVLQPLHM RAQELVRQHG RVTFLAIPRE LNRLADALAW EALDGRDWLA CAVNRHHAM
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