| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2647 |
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| Symbol | |
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| ID | 5540129 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3412374 |
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| End bp | 3413948 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640894770 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001432737 |
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| Protein GI | 156742608 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCTGC ATCCGGCGTC ATTGCGAACG ATAGTGACGC AATCTCTCCT CGCTCAAGAA
ATCGTCTCGC TGCGGATGCG CCTCGCAATG ACAATATGGC AAAGACGCGC CTTCTTTCAT
CCAAACTCAT ATGAGCGAGG CTTCGGATTG GTGCGGGCGC GACGCCCACG CTCCCAGTGC
TCCCAGGACC GGTGCGGGCG CAACGCCTGC GTGGGTGCGC CGTGCCGCCT GCCACACCAG
CGCCGCGTTA TGGATGCATC TTCCGCCTGC AAGATGTGGT ATGATAACCG TTCCTGCACC
TTCTCTGAAC CGACACAGAA ACCTATGCAC ACATCAACGC CTTCGCCTCG TTTTGCTGCA
CTGACCGCGC TGCGGTACCG CGACTTCCGG CTGCTCTGGG CTGGTCAGTT TGTGTCGATC
ACCGGCACGC AGATGCGCAA TGTCGCCATT GCATGGCAGG TGTACCGGCT GGCACAGGCG
GACAGCAGCA TTCGGGTTGA AATCGCGCTT GGACTGATCG GTCTGGCGCG CGTTATTCCG
CTGATCCTGA CGGCGATGTT CAGCGGTATG ATCGCCGACC GCGTCGAGCG GCGCAAAATT
CTGATTCTGA CCTCGCTCGT GGCGTTTGTG TGTTCAATAG TGCTGGCGCT TACCGGCGAG
ATGGAGCGCC CGCCGTTGCT GCTCATCTAC ACGATGGTGG CGCTGGCATC GGTCGCCGGC
GCCTTCGAAC TGCCGGCGCG TCAGGCAATC ATTCCCAACC TCGTTGCGCC ACAGCACTTG
CCAAATGCGT TGAGTCTGAA CATCGTCGCC TGGCAACTTG CGACGGTTAT TGGTCCGGCG
TTGTCAGGCG TCTTGATTGC TGCGGTCGGT GTTGCGCCAG TGTACTGGAT CGATGCCGCG
ACCTTTCTGG CAGTCGTTGC GGCAGCGTTG CTCATGCGCA CGCGCACCAT TCCGGCGCGC
ATCGAACCGG TGTCGCTCCG GGCGGCGCTG GCGGGGCTGC GTTTCGTCTT TTCACATCGC
CTGATTGCTG CAACCATGCT GCTTGATTTC TTCGCTACAT TTTTTGGCGC TACTGGAGTG
CTGCTACCGA TCTTTGCCGA TCAGGTCTTG CGGGTCGGAC CGACCGAACT GGGCTGGATG
TACGCCGCGC CATCGGTGGG AGCAGTGGTC GCTGCAACCC TGCTCAGCGG TGTGCGCATT
CCACGACAGG GGACGACGCT GCTCGCGGCT GTGCTGGCGT TTGGCGCATG CGTCGCAGTG
ATCGGGATGT CGCGTTGGCT CCCGCTAACG CTGGCAGCGC TGGCAGGCAT GGGTGCAGCG
GATACCGTCA GTATGGTCAT TCGCGGCGCG ATCCGTCAAT TGCTCACTCC CGATGAATTA
CGCGGGCGCA TGGTGGCGGT CAATATGGTC TTCTTTGCCG GCGGCCCGCA ACTTGGAGAA
ACCAGCGCCG GTTTTATCGC CAGCCTGATC GGTGCGTCTG CGGCGGTAAC CCTCGGCGGC
GTGGCGTGTA TCCTCCTGGT TGTTGGAACA GCGCTCAGCG TGCGTGAACT GCGCGAGTAC
CAGGGACCGG GCTGA
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| Protein sequence | MTLHPASLRT IVTQSLLAQE IVSLRMRLAM TIWQRRAFFH PNSYERGFGL VRARRPRSQC
SQDRCGRNAC VGAPCRLPHQ RRVMDASSAC KMWYDNRSCT FSEPTQKPMH TSTPSPRFAA
LTALRYRDFR LLWAGQFVSI TGTQMRNVAI AWQVYRLAQA DSSIRVEIAL GLIGLARVIP
LILTAMFSGM IADRVERRKI LILTSLVAFV CSIVLALTGE MERPPLLLIY TMVALASVAG
AFELPARQAI IPNLVAPQHL PNALSLNIVA WQLATVIGPA LSGVLIAAVG VAPVYWIDAA
TFLAVVAAAL LMRTRTIPAR IEPVSLRAAL AGLRFVFSHR LIAATMLLDF FATFFGATGV
LLPIFADQVL RVGPTELGWM YAAPSVGAVV AATLLSGVRI PRQGTTLLAA VLAFGACVAV
IGMSRWLPLT LAALAGMGAA DTVSMVIRGA IRQLLTPDEL RGRMVAVNMV FFAGGPQLGE
TSAGFIASLI GASAAVTLGG VACILLVVGT ALSVRELREY QGPG
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