| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2644 |
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| Symbol | |
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| ID | 5540126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3407373 |
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| End bp | 3409874 |
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| Gene Length | 2502 bp |
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| Protein Length | 833 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640894767 |
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| Product | Beta-mannosidase |
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| Protein accession | YP_001432734 |
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| Protein GI | 156742605 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0554464 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCAGA TTGTGCTCTC CAGCGGCTGG CGGCTCCGAC AGTACGATCC ATCGCGCGAA
TTCACCGCTC AGATCGACGA TGAGGAAGGA TGGATACCGG CGACAGTCCC CGGCGTCGTT
CATCAGGACC TGATCGCTGC CGGGCTGCTG CCAGACCCGT TCGATGGGCT GAATGAATAC
GCAGCGCAGT GGGTTGGCGA GGTTGCCTGG CTCTATCGGT GCGATTTCGA TGCGCCCGAC
AATAGTGCGC CGGATGAGAC CGTAGTGCTG TGCTGCGACG GTCTCGACAC ATTTGCGACA
GTCTGGCTCA ACGATGCGCC GGTGTTGACG AATGACAATA TGTTCGTTCC ACGCCGCGCC
GAAGTGACCC GCCTGATCCG GCGAGGGCGC AATCGGCTCA TGATGCTCTT CGATTCGGCA
CTGCGCCGTG GACGAGCGCG CGAAGCGGAG GACGGCGTTC TGCCAGTCTG GAACGGCGAT
AGCAGCCGCC TGTATGTGCG CAAGGCGCAG TACCACTACG GCTGGGATTG GGGTCCCACG
CTGTTAACCG CTGGTCCCTG GCGTCCGGTC CGTCTCGAGT TCTTTACAGC GCGCATCGCC
GATGTCTCCT GCCCGGTCGA GGTCGATCCC GATCTGCACC ACGCGACAGT CGCTGTGCAG
GTGGAGATCG AAGCGGGACA ACACACTGCG CGCAATACCG GGGAAATGAT GCGCTTCTTC
GCCGGGCTGA CCGTTCAGGT CGAGCTGATC GATCCTGATG GCGCACCGGT TGCGACTGCC
GCGCTGCCGG TCGAGGGAGG CAGCAGCGCA ACCAGACTGC ACGTGCCTGC ACCGCGTTTG
TGGTGGCCCA ACGGCTATGG CGATCATCCA CTGTACCGAC TGGTTACCAC GCTCCACGAC
AGCAACGGCG CGCTCGACCG GCGGGAACTG CGCATCGGGC TGCGACGGCT GCGTCTGGTG
CAGGCGCCGC TCGATCACGA ACCCGGAACC ACATTCCTGT TTGAAGTCAA CAACATTCCT
ATCTTTTGCG GCGGGGCGAA CTGGATTCCC GCCGACAGTT TCGTGACGCG CATTACCCCG
GAAATGTATC GCGGCTGGTG TCAGCAGGCA GCGGCGGCCA ACATGGTCAT GCTGCGCGTC
TGGGGCGGCG GCATCTACGA GGACGACACA TTCTACGACG CCTGCGACGA ATTGGGATTG
CTGGTGTGGC AGGATTTCAT GTTTGCCTGC GGCATCTACC CTGCACCCGG ATGGTTTCGC
GACAGTGTGC GCGCCGAGGC GGAGGCGCAG GTGCGGCGCC TGCGGCATCA CCCCTGCCTT
GCGCTCTGGT GCGGCAACAA TGAAGATTAT CAGATTGCCG CCGCCACCGG GCGCTACGAT
CCCAACCTTA CCCCGGAAGA GAATGCCGAC CGTTTCCCGG CGCGCCTGAT CTATGAGCGC
CTGCTGCCCG ATATCTGTGC TGTCCTCGAT CCAACGCGCC CCTACTGGCC CGGCAGTCCC
TACGGCGGCG CCGACGGATC GGATCAGACG TTTGGCGACC GACATACCTG GGATGTCTGG
CATGGACGTG TCGCGCCTTA CCAGGAGTAT GTTGCCTACC ATGGTCGCTT CGTCAGTGAA
TTCGGTATGC AGGCGTTCCC GGATCGCGCC ACAATCGAGG CGTTTGCGCC GCCTGCCGAA
CGCTACCCGC AGAGTCGCAC CCTTGATCAT CACAACAAAG CAGCCGACGG TCCCCGCCGC
CTGGCAGTCT ACCTGAGCGA CAATGTCCGC ATCCCGTCCG ATCTGGACGG GTACATCTAC
GCCACGCAAC TGGTGCAGGC GGAGGCGCTG GCGATGGCAA TCCGCTCCTG GAGACGACGC
TGGGGAGGAC CAGGACGCTA TGCAACGGCT GGCGCGCTGG TCTGGCAACT GAACGATTGC
TGGCCCGTCA TCAGTTGGTC GTTGATCGAC TACTATCGGC GCGCTAAACC GGCGCTCTAT
GCCGTGCGAC GCGCACTCGC GCCGATCGCT CCAGGGCTGG CGCGCACCGC CGATAGTGCC
GAGTTGTGGG TGGTCAATGG AACGACCGCC GCCGCAGATG TCGATGTCGA ACTGCGCACA
TGGACCCTCG GCGGCGATCT GGTGGTGCTC GACAAATTGC GTGTGTCACT CCTCCCCAAT
CGCACCACCG AACTGGGACA GTTCGGCTTC GATCCGGGGT CAGCGCTGAT CTTCGATGCC
CGTGTGATTA TGAACGATCA GGTCGTGGCG CGTGCCTCGC TCTGGCCCGA ACCGCTCAAG
TATCTGACAT TGCCCGATCC CGTGATCGTC CTGGATCTGG CGTCTGATGA TGAGCTGCAC
ATTCGCGCTG CTCGCCCTGC CAAGGGTGTG GTGCTCTTAG CCGGCGACGG CGTCGCCTGG
AGCGACAATT ACCTCGATCT GATGCCCGGC GACGAGCAGG TGATCCGCGC CGACGGTCTG
GGCGAGCGAC CGCTGAGCGT GCGCTGGCTC GGAATGGAAT AA
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| Protein sequence | MRQIVLSSGW RLRQYDPSRE FTAQIDDEEG WIPATVPGVV HQDLIAAGLL PDPFDGLNEY
AAQWVGEVAW LYRCDFDAPD NSAPDETVVL CCDGLDTFAT VWLNDAPVLT NDNMFVPRRA
EVTRLIRRGR NRLMMLFDSA LRRGRAREAE DGVLPVWNGD SSRLYVRKAQ YHYGWDWGPT
LLTAGPWRPV RLEFFTARIA DVSCPVEVDP DLHHATVAVQ VEIEAGQHTA RNTGEMMRFF
AGLTVQVELI DPDGAPVATA ALPVEGGSSA TRLHVPAPRL WWPNGYGDHP LYRLVTTLHD
SNGALDRREL RIGLRRLRLV QAPLDHEPGT TFLFEVNNIP IFCGGANWIP ADSFVTRITP
EMYRGWCQQA AAANMVMLRV WGGGIYEDDT FYDACDELGL LVWQDFMFAC GIYPAPGWFR
DSVRAEAEAQ VRRLRHHPCL ALWCGNNEDY QIAAATGRYD PNLTPEENAD RFPARLIYER
LLPDICAVLD PTRPYWPGSP YGGADGSDQT FGDRHTWDVW HGRVAPYQEY VAYHGRFVSE
FGMQAFPDRA TIEAFAPPAE RYPQSRTLDH HNKAADGPRR LAVYLSDNVR IPSDLDGYIY
ATQLVQAEAL AMAIRSWRRR WGGPGRYATA GALVWQLNDC WPVISWSLID YYRRAKPALY
AVRRALAPIA PGLARTADSA ELWVVNGTTA AADVDVELRT WTLGGDLVVL DKLRVSLLPN
RTTELGQFGF DPGSALIFDA RVIMNDQVVA RASLWPEPLK YLTLPDPVIV LDLASDDELH
IRAARPAKGV VLLAGDGVAW SDNYLDLMPG DEQVIRADGL GERPLSVRWL GME
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