Gene Rcas_2634 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2634 
Symbol 
ID5540116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3396145 
End bp3396666 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content59% 
IMG OID640894758 
Productcopper resistance protein CopC 
Protein accessionYP_001432725 
Protein GI156742596 
COG category[R] General function prediction only 
COG ID[COG2372] Uncharacterized protein, homolog of Cu resistance protein CopC 
TIGRFAM ID[TIGR01167] LPXTG-motif cell wall anchor domain 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATCAT TTCTTCGCCT CAAGCCCATG ATCGCCATGC TGACCCTGCT GTCGCTGATG 
TTCATCAGTG CGAGTCGGGC GCTGGCGCAT GCTGATTATG TTTCATCCGA ACCGCCAGCC
AACGGAACGG TCACCTCAGC GCCAGAGCGT GTCATCATCG TCTTTTCGCA GGAATTGAAG
CCGGAAGGCA ACACGATTCG CGTCACCGAT GCGCGCGGCA ATCAGGTTGA TCGCGGTGAT
ACAACGCTGG ATCGGAATGA CCCGAACCGC AAAACGCTCA TTGTGTCGCT CAGCCCCGGT
CTGAGTGATG GAGTCTACAC GGTGAACTGG AAGAACGCCA GTACCGACGG GCATAGTGAG
ACCGGACGCT TCCGGTTTAC GATCAATACC GGCACAACGC CAGCGGCCAC ACCGCTGCCT
GCTACATCCG GCGAGGAGAT GCCCGGGCTG GCACTGCTTG CAGTTGGTTC AGGGGCGTTG
TTGATCGGAT GGGCGCTGCG TCGCCGTGTC TGGCAACGGT GA
 
Protein sequence
MPSFLRLKPM IAMLTLLSLM FISASRALAH ADYVSSEPPA NGTVTSAPER VIIVFSQELK 
PEGNTIRVTD ARGNQVDRGD TTLDRNDPNR KTLIVSLSPG LSDGVYTVNW KNASTDGHSE
TGRFRFTINT GTTPAATPLP ATSGEEMPGL ALLAVGSGAL LIGWALRRRV WQR