| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2626 |
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| Symbol | |
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| ID | 5540108 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3386843 |
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| End bp | 3387442 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640894750 |
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| Product | ThiJ/PfpI domain-containing protein |
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| Protein accession | YP_001432717 |
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| Protein GI | 156742588 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.618286 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCTAC GCAAACGAAC AGTTGCGATC CTGATCTTCG ACGACGTTGA GTTGCTCGAT
TTTGCCGGTC CCTTCGAGGT ATTCAGTTCG GTGCGCAACC TGACCGGCGA TCACGAGCGA
TTGATGGACG TGTTTACCGT TGCCGAGTCG ACAGCGCCGG TGCGCTGCCG CAACGGGCTG
GTCGTGCAAC CGGAGTGGTC AATCGATGAA TGCCAAACGG TTGATGTCCT GGTCATTCCG
GGAGGCGCGG GTGTTCGCGC CGCGCTGGGG CGCAACCATG TGGTGGAATG GGTGCGCACA
CGCGCACAAG AAGCGGAACT GACGGTCAGT GTCTGCACCG GCAGTTTCCT GCTGGCTCAA
GCCGGGCTAC TAAGCGGTCG TCCGGCAACT ACGCACTGGG AGCGGATCGG CGAAATGCGT
GAACGCTTCC CGGAGGTGGA AGTCGTCGAA GACGAGCGCT GGGTCGATAC CGGCGACATC
ATCACCGCTG CCGGGGTAAG CGCCGGCATC GACGTGGCGC TGCACGTCGT TCGGCGGTTG
TATGGCGCCG ACGTCGCGCG CGCCACTGCA CTTGGCATCG AGTACGACTA CTGGGAGTGA
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| Protein sequence | MTLRKRTVAI LIFDDVELLD FAGPFEVFSS VRNLTGDHER LMDVFTVAES TAPVRCRNGL
VVQPEWSIDE CQTVDVLVIP GGAGVRAALG RNHVVEWVRT RAQEAELTVS VCTGSFLLAQ
AGLLSGRPAT THWERIGEMR ERFPEVEVVE DERWVDTGDI ITAAGVSAGI DVALHVVRRL
YGADVARATA LGIEYDYWE
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