| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2618 |
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| Symbol | |
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| ID | 5540100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3377070 |
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| End bp | 3378239 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640894742 |
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| Product | xylose isomerase |
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| Protein accession | YP_001432709 |
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| Protein GI | 156742580 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2115] Xylose isomerase |
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| TIGRFAM ID | [TIGR02631] xylose isomerase, Arthrobacter type |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACA TGTACGAACC CAAACCCGAA CACAAGTTCA CTTTCGGTCT CTGGACGGTC
GGCAATATCG GACGTGACCC GTTCGGCGAG CCGGTGCGCC ATCCGCTCTC GCCGGTCGAG
ATTGTCCATC TCCTGGCGGA TGTCGGCGCG TATGGCGTCA ATTTTCACGA TAACGACCTG
ATTCCGATTG ATGCAACGCC AGCCGACCGT GATCGTATCC TGCGTGAGTT CAAGGCGGCG
TTACAAGAAA CCGGGCTTGT CGTGCCCATG GCGACGACGA ACCTCTTCGC CGATCCGGTC
TTCAAGGATG GCGCATTTAC GTCAAACGAC CCAAAGGTGC GCGCCTATGC GCTGCAAAAG
ACCATGCGCG CCATCGACCT GGGAGTCGAA TGCGGCGCAA AGGTGTATGT CTTCTGGGGC
GGACGCGAGG GAGTGGAGAG CGATGCCGCA AAGGACCCGC AGGAAGGGCT GAAGCGCTAT
CGTGAGGTAA TCAACTTTCT CTGCGCCTAT GTCAAAGATC AGGGGTACGA CCTGAAATTC
GCACTCGAAC CAAAACCGAA CGAGCCGCGC GGCGACATCT ACCTGGCGAC CGTCGGGCAT
GCACTGGCGT TCATCAACAC GCTCGACCAC CCCGACATGG TCGGGCTGAA CCCGGAAGTC
GCGCACGAAA CAATGGCGGG GCTGAACTTC CTGCACGGCG TTGCGCAGGC ATGGGACGCC
GGCAAACTGT TCCATATCGA CCTGAACGAT CAGGTGATCG GGCGCTACGA TCAGGACTTC
CGCTTTGGCG CGGTGAATCT GAAAGCAGCG TTCTTTCTGG TGCGCTTCCT GGAGAATGTC
GGTTACCAGG GAAGCCGTCA CTTCGATGCG CACGCCTACC GCACTGAGGA TTACGAAGGG
GTCAAGACGT TTGCGCGCGG CTGTATGCGC ACCTACCTGA TCCTGAAAGA AAAGGCGCGT
CGTTTCGACG GGGATGCCGA AATTCAGGCG CTGCTCGCGG AAATCACAGC TGACGACGGC
ACGATGGCGC CGTTTCAGGG TGGCTACAGC CGCGACAAGG CGGATGCACT CAAGGCGCAT
CCGTTCGATC GCGTCGCGTT GGGGCGGCGC GGGCTGGCGT ATGAGCGTCT CGACCAACTG
ACCAACGAGT TGCTGCTGGG TGTACGCTAA
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| Protein sequence | MSDMYEPKPE HKFTFGLWTV GNIGRDPFGE PVRHPLSPVE IVHLLADVGA YGVNFHDNDL
IPIDATPADR DRILREFKAA LQETGLVVPM ATTNLFADPV FKDGAFTSND PKVRAYALQK
TMRAIDLGVE CGAKVYVFWG GREGVESDAA KDPQEGLKRY REVINFLCAY VKDQGYDLKF
ALEPKPNEPR GDIYLATVGH ALAFINTLDH PDMVGLNPEV AHETMAGLNF LHGVAQAWDA
GKLFHIDLND QVIGRYDQDF RFGAVNLKAA FFLVRFLENV GYQGSRHFDA HAYRTEDYEG
VKTFARGCMR TYLILKEKAR RFDGDAEIQA LLAEITADDG TMAPFQGGYS RDKADALKAH
PFDRVALGRR GLAYERLDQL TNELLLGVR
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