| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2598 |
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| Symbol | |
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| ID | 5540080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3350611 |
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| End bp | 3352020 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640894725 |
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| Product | integral membrane sensor signal transduction histidine kinase |
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| Protein accession | YP_001432692 |
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| Protein GI | 156742563 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR01386] heavy metal sensor kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.833045 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCAAC GTAGTACGAC ATTACGCGTA CGCTTTGCCA TCTGGACGGG CGGGTTGCTC
TGTGTCACAC TGTTGCTCTT TAGTGGGTTT GTTTATTGGC AAACCGCTCA AGGCTTGTCC
GAGTCACTTG ATACCGGCCT CCAAGCTAGC GCTCTCCAAA TCACGGCCAG TCTCAGTGGC
GAGCAGGTCA ATATCGAAGA TGGTCAGATC ACACTCGATG AGCATCTGTC CGATCCGACG
TTATTGGCGC AATTGCAAAC CCAAGGGCTA ACGATCCGGG TTCTCGACCG CACCGGTGCG
ATTCGGCAAG CGGTCGGCGC TTATCAACAT GCACCGGTCG ATCCGGTCAG TTTACGAGCA
CGCTCTGGTA CACCAGTGTG GCATACGCAG ATCCTTCCCG ATCGGACAGC AGTGCGGGTC
TATACCGTTC CGGTATACGA ACACAGCCAA TCGGTTGGCT TAATCCAGAT CATACAGTCG
CTTGAACCGG TAGTAGAAAC GCTACAGCAA CTCCAAACCG CGTTCGTAAT CGGTATTCCT
GCTCTCACCG TGCTGACCGG ATTGGCGAGC TACTGGTTAG CTGCACAGGC ATTACAGCCT
ATCACCAACA TAATCCGTAC TGCTCAACAG ATTTCGGCCA CCGATTTACA TGCCCGCATC
ACCTTACCAC CAACTGACGA TGAAGTTGGT CGGCTGGCAG CTACGTTCAA CAGTATGCTC
GCCCGACTAG AAGATGCGTT TCGGCGTGAA CGGCAATTTA CCGCCGATGC GTCGCACGAA
TTGCGTACAC CGGTTGCCGC TATGGAAGCG ATTATTACCG TGACCCGTGA ACGTCCACGC
AGTGTCACCG AATATACCCA AGCGCTCGAT GATTTATTGG TGCAAACTCG CCGTCTTCGC
AGCTTGATCG ACGATCTGTT GCAACTGACA CGTAGTGAAA CCCGGTATCG CTCTACACAC
ACACCGGTCA ACCTATCACT CCTGCTCGAA GATGTCACCG AAACGATGCG TCCTCTTGCC
GAAGAGCGTG GGTTGGTCAT CGTTACCGAG ATTAGTCCCA ACTTAGTTGT GGTAGGTGAT
AGTGATAGTC TTATTCGCCT CTGGCTCAAT GTACTTGATA ACGCGATCAA ATATACGCCC
CGCGGTACGA TTACCCTCCG CGCCTTTCGT ACCGGTGATC AGGTCACGGT CACAGTAACC
GATAGCGGTA TCGGTATTGC GCCTGAACAT CTTCCCTTTA TCTTCGAGCG TTTTTATCGT
GTTGATCCTG CCCGCAGTGG TAATGGTAAC GGCCTTGGCC TTGCAATCGC CCGCGAGATC
GTGCGGCTCC ATCACGGTAC GATCACCGTT ACGAGTGAAT TGGGCCACGG CACGACCTTT
ACTGTGAACC TCCCGACCGA TCTCGGTTGA
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| Protein sequence | MIQRSTTLRV RFAIWTGGLL CVTLLLFSGF VYWQTAQGLS ESLDTGLQAS ALQITASLSG
EQVNIEDGQI TLDEHLSDPT LLAQLQTQGL TIRVLDRTGA IRQAVGAYQH APVDPVSLRA
RSGTPVWHTQ ILPDRTAVRV YTVPVYEHSQ SVGLIQIIQS LEPVVETLQQ LQTAFVIGIP
ALTVLTGLAS YWLAAQALQP ITNIIRTAQQ ISATDLHARI TLPPTDDEVG RLAATFNSML
ARLEDAFRRE RQFTADASHE LRTPVAAMEA IITVTRERPR SVTEYTQALD DLLVQTRRLR
SLIDDLLQLT RSETRYRSTH TPVNLSLLLE DVTETMRPLA EERGLVIVTE ISPNLVVVGD
SDSLIRLWLN VLDNAIKYTP RGTITLRAFR TGDQVTVTVT DSGIGIAPEH LPFIFERFYR
VDPARSGNGN GLGLAIAREI VRLHHGTITV TSELGHGTTF TVNLPTDLG
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