| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2590 |
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| Symbol | |
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| ID | 5540072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3342527 |
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| End bp | 3344935 |
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| Gene Length | 2409 bp |
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| Protein Length | 802 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640894717 |
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| Product | glucan 1,4-alpha-glucosidase |
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| Protein accession | YP_001432684 |
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| Protein GI | 156742555 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | [TIGR01535] glucan 1,4-alpha-glucosidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.767497 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACAAA CAACGGTACG CTATGCACCC GGTTGGCCCG GTATTCCGGC ACGCTGGACT
TCGAGCGCCA AAACCGGGAT CGGAACTGCG TTAAACCCGG CCAGCCGGGT CTGGTTTACG
ATTAGCCACG GTATTCTCAA CGAGATCTAC TATCCGCGGA TTGATCAAGC TTGCACCCGC
GATTGTGGCT TGATTGTCAC CGATGGTCAT TCGTTTTTCT CTGAAGAGAA ACGTCATACC
ACCAGCATCG TTACGATGCT GGCCGTAGGT GTGCCGGCTT ACCGATTGGT GAACAGATGC
CAACAACATC GCTATCAGAT CGAGAAAATG GTTATCACCC ATCCAATGTA CAACGCGGTG
TTGCAGCAGA TTACCTTTAC TCCACTGCAA GGTTCGCTTG ATCAGTATTC GGTGTTTGTA
TTACTGGCTC CGCATATCGG TAATCGTGGT GCTGAGAATA CGGCATGGAT CGGTGACTAC
AAAGGATTGC CGATGCTCTT TGCCGAGCGG TATGGTCTTG CCTTGGCTGT AGCTTGCTCG
GCCCCGTGGA CAGCACGCTC GGTCGGGTTT GTCGGCAGCT CTGATGGCTG GCAAGATTTG
GTCCGTAACT ATCGACTGAC AACTCTTTAC GAACGGGCAG AAAACGGCAA TGTGGCCCTG
ACCGGCGGGA TCGATGTGAT GGCATGTCAC GGGCAGTTTA CTATCGCGAT TGGCTTCGGT
CAAACATGGG CTGAAGCGGC GTGGCATGCC CGTGCCGGTC TGAGCGACGA ATTCGACTCC
GTCTGCGCTA CGTACATCCA GGCTTGGCAA ACGTGGCAAC AAACGCTCAC TGCTCTGACC
ACCATTCATC AACAGGTGAG CGCGATGGTG TTACGGGTAC ATGAATCGAA GCAATTTCCC
GGTGGAAGTA TCGCCAGCCT CTCTATTCCA TGGGGTATGG CCAAAGGTGA TGATGACCTC
GGTGGTTATC ATCTGGTGTG GCCGCGCGAT CTGGTCGAAA TTGGTGGTGG ACTACTGGCA
ATCGGAGCCA ATGATGATGC ATGGCGTATT CTCAATTATC TTGCCCTTAC CCAAGAACCC
GATGGACACT GGCCGCAAAA TATGTGGCTC GACGGTATAC CGTACTGGAA CGGTATTCAA
ATGGACGAAA CGGCATTTCC TATCTTACTC CTCGACCTGG CAGTAACGAC TGGCGCGATT
GATCCGGCTA CCGTTTACCG CTATTGGCCA ATGGTTCGAC GCGCGGCGAG TTTCCTTGTT
CGCAATGGAC CGGTCACCGC CCAAGATCGC TGGGAGGAGA ACGCCGGCTA CTCACCCTTT
ACACTAGCAG TGGAAATTGC TGCCCTGCTC GTGACCGCCG AACTGGCCGA ACAGTATGGT
GAACCGACTA TCGCTGACTA TCTCCGCACC ACAGCCGATA GCTGGAATGC CGATATTGAC
CGCTGGTGCT ACGTGACCGG AACCGATCTT GCCCATCGTG TCGGAGTAAC GGGGTATTAT
GTACGGATTG CACCACCCGA TGTCGCCGAA GCGGCTTCAC CAATGCAAGG CTACGTGCCG
ATTAAGAATC GTCCACCCGA CCAAGCCAAC GCACCGCTGA GCTATATCGT CAGTCCTGAT
GCTTTAGCCC TTGTGCGTTT CGGCTTGCGC GACCCACACG ATCCACGGAT TGTAAATACA
GTACAGGTCA TCGACGCACT ATTGAAGATC GATACACCGT GTGGACCGGT GTGGCGACGG
TACACCGACG ATGGTTACGG TGAACATCAA GATGGTGCTC CATTTGACGG CACCGGTATC
GGTCGTGGAT GGCCGTTACT GACCGGTGAA CGCGCTCACT ACGAACTTGC AGCCGAGCGA
GTTGAAGCGG CGAAACGACT GCTCATAACG TTGGAAGCGT TCGCGAACGA AGGTGGTTTC
CTTCCCGAAC AGGTGTGGGA CAGTACCGAC ATTCCCGAAC GAGAGCTTTT TTTTGGCCGG
CCAGCGGGGT CAGCCATGCC GCTCGCGTGG GCTCATGCCG AACACCTTAA ACTTTGCCGT
TCTCTTGCCG ACCAACGTCT GTTTGACATG CCACGAGTGA CCGCACAGCG GTATCTCAGT
CGGCAGGTGC AGAGCAAGAT TGCCATCTGG CGTCCGAACC AAAAACGACG GCGAATAGTG
GCAGGGATGA CGTTACGTAT CGATCTGAAT GCCGCTGCGA TGATCCACTG GAGCGCCGAT
CACTGGCAGA CGATTCACGA TACCACGACG GCTGCTAGCG GACTGGGGAC CTTTTTCGCT
GATTTACCGA CCGAAACGTT GGCGCCTGCG ACTGAGATCG TGTTTACGCT GTACTGGATC
GATCAACAAC GGTGGGAAGG GCGCGATTAC ACAGTGCAGA TCGAAGCATC CGGCATAAGC
GGAGAGTAG
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| Protein sequence | MTQTTVRYAP GWPGIPARWT SSAKTGIGTA LNPASRVWFT ISHGILNEIY YPRIDQACTR
DCGLIVTDGH SFFSEEKRHT TSIVTMLAVG VPAYRLVNRC QQHRYQIEKM VITHPMYNAV
LQQITFTPLQ GSLDQYSVFV LLAPHIGNRG AENTAWIGDY KGLPMLFAER YGLALAVACS
APWTARSVGF VGSSDGWQDL VRNYRLTTLY ERAENGNVAL TGGIDVMACH GQFTIAIGFG
QTWAEAAWHA RAGLSDEFDS VCATYIQAWQ TWQQTLTALT TIHQQVSAMV LRVHESKQFP
GGSIASLSIP WGMAKGDDDL GGYHLVWPRD LVEIGGGLLA IGANDDAWRI LNYLALTQEP
DGHWPQNMWL DGIPYWNGIQ MDETAFPILL LDLAVTTGAI DPATVYRYWP MVRRAASFLV
RNGPVTAQDR WEENAGYSPF TLAVEIAALL VTAELAEQYG EPTIADYLRT TADSWNADID
RWCYVTGTDL AHRVGVTGYY VRIAPPDVAE AASPMQGYVP IKNRPPDQAN APLSYIVSPD
ALALVRFGLR DPHDPRIVNT VQVIDALLKI DTPCGPVWRR YTDDGYGEHQ DGAPFDGTGI
GRGWPLLTGE RAHYELAAER VEAAKRLLIT LEAFANEGGF LPEQVWDSTD IPERELFFGR
PAGSAMPLAW AHAEHLKLCR SLADQRLFDM PRVTAQRYLS RQVQSKIAIW RPNQKRRRIV
AGMTLRIDLN AAAMIHWSAD HWQTIHDTTT AASGLGTFFA DLPTETLAPA TEIVFTLYWI
DQQRWEGRDY TVQIEASGIS GE
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