| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2544 |
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| Symbol | |
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| ID | 5540026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3284165 |
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| End bp | 3285064 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640894674 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001432641 |
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| Protein GI | 156742512 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.238071 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0688071 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCAA ATCTTCAGCA AAGCGCAATG GCAACAGCGC AGGCACAGCG TCGTCCGCTG
TTCGGTATGC GCAATCAGCG ACTGGCGCAC CGGGTGATCG TCTATGCGCT GCTGCTGGCG
CTGTCGGTGT TATTCATTCT TCCCTTTATG TGGATGGTCT CGACATCGCT GAAGAACAGC
GAAGACGTCT TTACCTATCC GCCGAGTTTC TTTCCAACGA CCTTTCTCTG GCAGAATTAT
CCGCGCGGCT GGACGATCCT GCCGTTCAAT ACGTTCCTCC TCAACTCGCT GATTGTGACA
TTCACCAATG TGATCGGCAA TCTGATCTCC TGTTCGCTGG TGGCATTCGG GTTTGCGCGA
TTGCGCGCGC GCGGACGGGG CATCCTGTTC CTGGCGTTGC TGGCGACCCT CATGATCCCG
CGTGAAGTGA CGATTGTGCC GCGCTTTTTG CTCTTCAGCC AGATGGGGCT GGTCAATACC
CTCTGGCCCC TCATTCTTCC GGCATGGTTT GGGTATGCGT TCTTCATTTT CCTGCTGCGC
CAGTTCTTCA TGACCATCCC GACGGAGCTG GACGATGCGG CACGCATTGA TGGCGCATCG
TCGCTGCGCA TCTTCTTCGA GATCATTCTG CCGCTCTCGA AACCAGCGCT GGCGACGGTG
GCGATCTTTG CGTTCATTGG CAACTGGAGC AATCTGCTCG ATCCGTTGAT CTATATTCGC
TCGCAGGAGC TGTATACCCT GGCGCTCGGT CTGAACCTGT TCCGCGGGCA GAACTTTACG
CAGTTCAATC TGCTCATGGC GGTGTCGATC ATTACCCTGA TCCCGGTATT GACGGTCTTC
TTCCTTTCAC AGCGCCTCTT CGTGCAGGGC GTGACCCTGA CCGGTATGGG GGGACGGTAG
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| Protein sequence | MSANLQQSAM ATAQAQRRPL FGMRNQRLAH RVIVYALLLA LSVLFILPFM WMVSTSLKNS
EDVFTYPPSF FPTTFLWQNY PRGWTILPFN TFLLNSLIVT FTNVIGNLIS CSLVAFGFAR
LRARGRGILF LALLATLMIP REVTIVPRFL LFSQMGLVNT LWPLILPAWF GYAFFIFLLR
QFFMTIPTEL DDAARIDGAS SLRIFFEIIL PLSKPALATV AIFAFIGNWS NLLDPLIYIR
SQELYTLALG LNLFRGQNFT QFNLLMAVSI ITLIPVLTVF FLSQRLFVQG VTLTGMGGR
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