| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2516 |
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| Symbol | |
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| ID | 5539998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3245835 |
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| End bp | 3247172 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640894647 |
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| Product | glycogen debranching enzyme-like protein |
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| Protein accession | YP_001432614 |
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| Protein GI | 156742485 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3408] Glycogen debranching enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCAGC ATCACCATCT GATCAATGAA GCGCGCGAGC GCGCTCTCGA AACGCTCCAT
CGTTGCCGGA CGCCGGTCGG ATTTCGGGCG TCGGCGCTGG CTGCCGGTTA TCCGCAGATC
TGGGCGCGCG ACAACGGCAT CATAATGCTG GGAGCGGTCG CCAGCGGCGA TCCCGAACTG
ATCGCATGCA GCCGTGCAGC GCTCGAGACT CTCGGCGCAG CGCAGTCACG CCGTGGACTC
ATTCCGCTGA ACATCAACCC CGACACCGGC TACATCAGCA CCGAGAACGC CGGCGCTGCC
GACTCGAACC TCTGGTTCAT TCTAGGTCAC TATCTTCACT ACTGCGCCAC CGGCGACGCA
GCGTTCGTGC GGGAGCACTG GCGCGTGATC GACCGGGCAA TGGTCTGGCT CGAATACCAG
GATATGAACG AGTGCGGTCT GATCGAAATT CCCGAAGCAG GCAACTGGAT GGACCTGTTG
GCTGTGCGCT ACAACACGCT CTACGACAAT GTCCTGTACT ACGCGGCTGC ACTGGCGCAC
GAGCAACTGC GCGCCGTCGT CGAGCCGCAG ATGGCGGCGC ATCGACTAAC AATTGACGCA
GCGGGCATTC ATGAACGGAT CAATCTTCTT TTCTGGATCG ACCGCTGTTG GGTAGCAGAA
CATTTCGCCG AGCACCTCGA GCGTTTGAAG GCAATGCGAC TGGAATGGTT CATGCTCTAT
CACAATATTG GCATGATTTC CAGCCGACCG TTCTACCTTC CGTGGGTCGC CTTTCGCGAG
TTCGGCGACT GGTGCGACAG CCTGGCCAAT CTGCTCGCCA TCCTGACCGG CGTTGCCGAC
GGGCATCGCA CCGAGCACAT CCTGCGTTTT ATGCATCAGG TGGGCATGGC AGAACCGTAC
CCGACCAAAG CCATCCATCC GCCGATCTAT CCCGGCGAGG CGAACTGGCG CGAATACTAC
CGCAGTCGCA CCCTCAATCT GCCGCATCAG TATCACAATG GCGGCATCTG GCCCATGATC
GGCGGCTTTC ACATCGCGGC GCTCGTGCGC CATCGCTGGC AGGCGCAGGC GGAGCGCCTG
CTGCTGGCGC TCGCGGACGG CGTTCGTCAG GGATTGCACG ATGATTGGGA ATTCAACGAA
TGGATGCACG GCGAAAGCGG TCATCCGATG GGATACGCCC AACAGGGATG GTCGGCGGCG
ATGTATCTGT ATGCCGATCA TGTCGTGCGA ACAGGGCGGA TGCCGTTGTT CGATCAGTTG
TTGGCGGCAA AGCCAGCCTC GGCGGTGGCG ATGGAGATCA ACGACGCCTT CGTCCGCCCC
GGCGGGGGAC CCGTGTAG
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| Protein sequence | MNQHHHLINE ARERALETLH RCRTPVGFRA SALAAGYPQI WARDNGIIML GAVASGDPEL
IACSRAALET LGAAQSRRGL IPLNINPDTG YISTENAGAA DSNLWFILGH YLHYCATGDA
AFVREHWRVI DRAMVWLEYQ DMNECGLIEI PEAGNWMDLL AVRYNTLYDN VLYYAAALAH
EQLRAVVEPQ MAAHRLTIDA AGIHERINLL FWIDRCWVAE HFAEHLERLK AMRLEWFMLY
HNIGMISSRP FYLPWVAFRE FGDWCDSLAN LLAILTGVAD GHRTEHILRF MHQVGMAEPY
PTKAIHPPIY PGEANWREYY RSRTLNLPHQ YHNGGIWPMI GGFHIAALVR HRWQAQAERL
LLALADGVRQ GLHDDWEFNE WMHGESGHPM GYAQQGWSAA MYLYADHVVR TGRMPLFDQL
LAAKPASAVA MEINDAFVRP GGGPV
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