Gene Rcas_2512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2512 
Symbol 
ID5539994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3240808 
End bp3241794 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content61% 
IMG OID640894643 
Producthypothetical protein 
Protein accessionYP_001432610 
Protein GI156742481 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCATCGGA TATTATACAT GCGCTGGCAA AGCATGCGTC TACTATTCTC CTCTGTGGCA 
TGCGTGGCGT TATGCTGCCT GTTGGTCGCT TCCACCGCCG CTCAAAGCGC TATCCCTGAT
ACGACGGTGT ATGAGTCATG GTTGCGCGAA GCATTCACTG CCGCGCAACG CCGTGATCGT
GTCGGTCTTG AAGAAGCGGC GGATCGCCTG ATTGCAACGA CGGCAGTGCG CCTGCCCGAT
GGAACGGTTG TATCGGTGAG CAATGCCTGG TTGCAGGATG CATTGTCGTC ACCGACCCCT
GATTTTCCAC TGATCGCGGC GCGTCTCGGA GCGCTGATCG ACGCGCGGGC GCTGCCAATG
CCATCGGCGC CAACCGATGC GCTCGAACGA CTGGATCGCC TGCTTTCGGC GCCACCGTTT
GGTCGTTCCG AGACGCCTGA AACACCGCAG TGGCTGATCG ATTTCTTCGA CTGGCTGGCG
TGGGTGATCG AAACCCTTCT GCGTCCGCTC GAAGCCGTTC CACCTGCTTC AACCAATGTA
GTCGCCTGGC TGCTGACGCT GGTCGGCATT GTGCTGTTGC TGGCAGTGAT CGTGTATCTG
ATCATCAACC TGCGGCGCGG TATGGTGCGC GACGCACAGA TCGCCGCACA CAGCGACGAT
CCTGTGCCGA CGGCGGCTGA GGCGTTCGAT CAGGCTGGCG CTCTGGCGCG CGACGGCGAT
TACCGTGCAG CGGTGCGCAG TCTCTATCTT TCAGCGCTCC TCTGGCTCGA TGAACAGGAC
ATGGTGCGCT ACGACCGCGC ATTGACCAAC CGCGAGTATC TGGAACGGGC GCAACGCAAT
CCCGCATTGC TGGCGCGCCT GACGCCGGTG ATCGAAACGT TCGATCAGGT CTGGTACGGT
CATGCGCCTG TCGATGCATC GGCGTTCGCG GCGTATCGCC AACAGATCGA GGCGTTGCGC
CGCGAGACGG GAGCGCAACA GGCATGA
 
Protein sequence
MHRILYMRWQ SMRLLFSSVA CVALCCLLVA STAAQSAIPD TTVYESWLRE AFTAAQRRDR 
VGLEEAADRL IATTAVRLPD GTVVSVSNAW LQDALSSPTP DFPLIAARLG ALIDARALPM
PSAPTDALER LDRLLSAPPF GRSETPETPQ WLIDFFDWLA WVIETLLRPL EAVPPASTNV
VAWLLTLVGI VLLLAVIVYL IINLRRGMVR DAQIAAHSDD PVPTAAEAFD QAGALARDGD
YRAAVRSLYL SALLWLDEQD MVRYDRALTN REYLERAQRN PALLARLTPV IETFDQVWYG
HAPVDASAFA AYRQQIEALR RETGAQQA