| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2495 |
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| Symbol | |
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| ID | 5539976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3215749 |
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| End bp | 3217455 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640894625 |
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| Product | anti-sigma-factor antagonist |
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| Protein accession | YP_001432593 |
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| Protein GI | 156742464 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
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| TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACGT CCGCCCACAC CACCAGACCT TCCCTGATCG GGCGCGACAT GTCCCTGCGC
GCGCGTCTGA TCCTTGGATA TGGCATCATT GTATCGCTGA CGCTGATCTT TGGTCTCTTT
ATGCTTACTT ATACGCGTGG CGTCCGCAAC CGCCTGGAAA CGCTGAGCGC CGATGTCACT
ATCGATACAC GCTACAGCAT CGAAGCAGTG ACGGCAGTTG CCGAGGCGCA ACGCGCGCTT
GATCGCTTCC TTCAGCAACC GAATGAACGA CACTATCAGG ATGCCGCGCG CCAGATCGAT
TTCTTGCAGC GAACGATTGA GCGCCTGGAG CGAGACGCAC ACAACCCGGC GATGGTCGGT
CATCTGCGCC GGATTGGGAA CCAGGCAGCC ACATACCGGC AAATTTTTGA GGAGACGCGC
AACAGCATCG CTGCCCGGCA ACGCGCGCGC GATGATCTTT ATACTGCGTT TCTCCAGCAA
TATCAGACGA TCGAACAGGC AATCAGCAAT GCCAGACCGA TCGCTCCATC TGACTATCTG
GCGCTCATGG ACCTGAGCCG CGCCAGCACG CGCCTTCAGT TGGCATATGT CTGGATTGGA
CGAATGGAAA GCGAGGACAC GGCAACTGCG GCAGACAACG CCCTCGCGGA ACTGCGCCAG
GCGCGCACCT TTTTGCGGCG GTATCTTGTG CTGAATACTA ATCCGCGCAT TGTGCGACCG
GAGGATCTCG AGCGTCTTCA GAGCGTTTCG GAGAGTTTTG ATCGTTCGAT CATCAGTATC
GCCAGTCTCT CCAGCGCCTC CATCCGCACC GAAGTGCTCA TCAACAGCCG TCTGAAGCCG
CACGCAGCGC AAATGTCCCG CGAAGCGACA GCATTGTCCG ATACGGCATT GATGGCGCTG
AGCATCGCCG CAGTTGATAT TAGCCGGGAA ACCTCGCAGA TACGGACGAT CATTAGCAGT
GTACTCGCGC TCCTTCTGAT AGCCGGAGGT GCGCTCGGCG TCCTGCTGGC AGCGCTCATT
ACCCGCCCGC TCAATGAACT GGTTGCGGCC ACTGCGCGCC TGGCGCGCGG CGAGGGAGCT
CTGCGGGTGC AACCACGCGG CGGGCGTGAA CTGATCCTGT TGGCGCACGC ATTCAACGAT
ATGGCAGCGG AACTCGAACG TGAACGCGCC GAGATCCGTC GCCAGAACGC ATTGCTGGCA
GAACGTGCGG CGGAACTCGA ACAGACCCTG CACCAGCTTC GTGAAGAAAC GGCGGCGCGC
GAGCAACTGA GCGCCACCGT GCGCCAGCTC AGCGTGCCGA TTATTCCGAT CATGGAAGGG
GTGCTGGTTG CGCCGCTGGT TGGCGAGATC GATGCTGAAC GCGCCCAACT GTTGCAGCAG
CGTCTGCTTC ATCGTATTGT CACCGAACGC GCACAGGTGG CGATCCTCGA CATCACCGGC
GTCCCCGTGG TTGACGGACA GATCAGCACG TGGTTAATCC AGGCGACCAC CGCCGCGCGT
CTACTCGGAG CGCGCTGCAT CCTCGTCGGC ATCAATCCAG AAGTCTCGCA GGCGCTCGTT
GCCAGCGGCA TCGACCTCGG CGACCTGGCG ACCCGCGCCA CCCTCCGCGA AGGGCTGGAG
TATGCCATGC GCATCATGCG CGCGGCGTCA GGCGTGAGGC AAGAGGCGAA CGGCATCAGG
CACGCGACGG TGCGTGTGAG GCATTAG
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| Protein sequence | MATSAHTTRP SLIGRDMSLR ARLILGYGII VSLTLIFGLF MLTYTRGVRN RLETLSADVT
IDTRYSIEAV TAVAEAQRAL DRFLQQPNER HYQDAARQID FLQRTIERLE RDAHNPAMVG
HLRRIGNQAA TYRQIFEETR NSIAARQRAR DDLYTAFLQQ YQTIEQAISN ARPIAPSDYL
ALMDLSRAST RLQLAYVWIG RMESEDTATA ADNALAELRQ ARTFLRRYLV LNTNPRIVRP
EDLERLQSVS ESFDRSIISI ASLSSASIRT EVLINSRLKP HAAQMSREAT ALSDTALMAL
SIAAVDISRE TSQIRTIISS VLALLLIAGG ALGVLLAALI TRPLNELVAA TARLARGEGA
LRVQPRGGRE LILLAHAFND MAAELERERA EIRRQNALLA ERAAELEQTL HQLREETAAR
EQLSATVRQL SVPIIPIMEG VLVAPLVGEI DAERAQLLQQ RLLHRIVTER AQVAILDITG
VPVVDGQIST WLIQATTAAR LLGARCILVG INPEVSQALV ASGIDLGDLA TRATLREGLE
YAMRIMRAAS GVRQEANGIR HATVRVRH
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