| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2479 |
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| Symbol | |
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| ID | 5539960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3191174 |
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| End bp | 3192106 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640894609 |
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| Product | branched-chain amino acid aminotransferase |
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| Protein accession | YP_001432577 |
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| Protein GI | 156742448 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | [TIGR01122] branched-chain amino acid aminotransferase, group I |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTCCA ACCGTTTTGC GTTCTTCAAC GGGGAATTTG TTCCAATCGA ACAGGCGCAA
GTCAGTGTGA TGACTGCGGC GCTGAACTAT GGTCTCGGTG TCTTCGAAGG CATTCGCGCC
TACTGGAATG CCGATGATGG TCAGTTGTAC GTTTTCCATC TCCGCGAACA CATGGAACGT
CTGAGACGCT CGTGCAACAT CATGTTCATG AATCTGCCCT ACAGCGTCGA TGAACTGTAC
GATCTGACCG TAGAACTGCT TCGACGTGAA GCCTTTCGTG AGGACGCCTA TATTCGTCCG
CTGGTCTTCA AGAGCGACCA TACTATCGCT GTTCGCCTCA ACAATATGAC CGACGCCTTT
GTGCTCTACG CCGTTCCCTT TGGTCAATAC ATTCCCGGAA CGGCAGTGCG CGCATGCGTA
TCCTCCTGGC GGCGCATCGA GGACAATATC ATGCCATCGC GCGCAAAGGT CTCCGGTGGG
TATGTGAACT CGGCGCTGGC GAAGACGGAG GCGCTACTCA ACGGCTACGA TGAAGCGATT
GTGCTCGGCG GCGACGGGCA GGTCTCGGAG GCGAGCGCGG CGAACCTGTA TATTGTGCGC
AACGGCGCTC TCATTACGCC GCCGATCACC AGCGATATTC TCGAAGGGAT CACCCGGCGC
GTGGTGGCGC ACCTGGCGCA GGCGGAGCTG GGTGTGCCGG TGATCGAGCG ACCCATCGAT
CGCACCGAGT TGTATGTGGC GGAGGAAGCC TTCTTCTGCG GCACCGGCGC CGAAGTCAAA
CCGATTATCG AGATCGACCG GCGACCGGTG GGGAGTGGCG CTGTTGGCGA GATTACTGCG
CGCCTGGCGG AATTGTATAG CGCTGTGGTG CGTGGATGCC TGCCCGCCTA CCGCGCTTGG
TGTACGCCGG TGTACATCGA CGAAGGAGCA TGA
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| Protein sequence | MTSNRFAFFN GEFVPIEQAQ VSVMTAALNY GLGVFEGIRA YWNADDGQLY VFHLREHMER
LRRSCNIMFM NLPYSVDELY DLTVELLRRE AFREDAYIRP LVFKSDHTIA VRLNNMTDAF
VLYAVPFGQY IPGTAVRACV SSWRRIEDNI MPSRAKVSGG YVNSALAKTE ALLNGYDEAI
VLGGDGQVSE ASAANLYIVR NGALITPPIT SDILEGITRR VVAHLAQAEL GVPVIERPID
RTELYVAEEA FFCGTGAEVK PIIEIDRRPV GSGAVGEITA RLAELYSAVV RGCLPAYRAW
CTPVYIDEGA
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