Gene Rcas_2433 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2433 
Symbol 
ID5539914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3126996 
End bp3127550 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content61% 
IMG OID640894563 
ProductUracil phosphoribosyltransferase 
Protein accessionYP_001432531 
Protein GI156742402 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2065] Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0428967 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.168126 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGAAA AGCAAATCCT CGATGCCGAC GACATTCGCC GCGCAATGAC GCGCATTGCG 
CACGAGATTG TCGAGCGCAA CGCTGGTGTG CGCGATGTGG CGCTTGTCGG CGTCCGGCGG
CGCGGCGTTC CCCTGGCGCT GCGTCTTGCA GCGGCGCTGG AAGAGATCGA AGGAGTCCGC
GTACCGGTCG GAATTCTCGA TATTACGCTG TACCGCGACG ATCTCGGCAT TCGTGGACCG
GCGCCGGTCG TGCATGCGAC CGACATCCCC TTCGACATCA ATGGGCGCAC GGTAGTTCTG
GTGGATGATG TACTGTATAC CGGGCGAACC GTGCGCGCGG CTCTTGATGC GCTTACCGAT
TTTGGCAGAC CGGCGCGCAT TCAACTGGCA GTGCTGATTG ATCGTGGCCA TCGTGAACTG
CCGATCCGCG CCGATTTTGT GGGCAAAAAC GTTCCGACAT CGCGGGATGA ACGGATCGCC
ACACGCCTGC ACGAGGTCGA TGGCGGTGTG GATGGCGTCT TCATCGTGCG TGTTTCGGAG
AGCACAACGG AATAA
 
Protein sequence
MGEKQILDAD DIRRAMTRIA HEIVERNAGV RDVALVGVRR RGVPLALRLA AALEEIEGVR 
VPVGILDITL YRDDLGIRGP APVVHATDIP FDINGRTVVL VDDVLYTGRT VRAALDALTD
FGRPARIQLA VLIDRGHREL PIRADFVGKN VPTSRDERIA TRLHEVDGGV DGVFIVRVSE
STTE