Gene Rcas_2417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2417 
Symbol 
ID5539898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3109546 
End bp3109920 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content51% 
IMG OID640894547 
Producthypothetical protein 
Protein accessionYP_001432515 
Protein GI156742386 
COG category[S] Function unknown 
COG ID[COG2361] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.629588 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACCGG AAGAGCGTGA TCCCGCTTAC CTTTGGGATA TGCTTATAGT GGCTCGATCA 
GTGGTGGAGT TTACGCACGA TATAACACGT GATGCGTTCT TGAGCGACAA TAGAGACGCG
GAAATCATAA GACTGGCTGT TGAGCGCAAA CTCGAAATCC TGGGAGAAGC GGCGCGACGA
GTAAGCCCGC ACTTTCGGGA AACGCATCCA GAAATTCCCC GGGCGCAAAT CATCGGATTG
CGCAATCTGA TCAGTCACGA ATACGATAGA GTCGATCACG AACGCATTTA TGCCATCGCA
CGCGAAGAGG CGCCACAGTT GATTGCTCTT TTAGAACCTC TAATTCCGCC GCTTCCTCCT
ACGGAAGACG ACTGA
 
Protein sequence
MQPEERDPAY LWDMLIVARS VVEFTHDITR DAFLSDNRDA EIIRLAVERK LEILGEAARR 
VSPHFRETHP EIPRAQIIGL RNLISHEYDR VDHERIYAIA REEAPQLIAL LEPLIPPLPP
TEDD