Gene Rcas_2416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2416 
Symbol 
ID5539897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3109254 
End bp3109565 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content56% 
IMG OID640894546 
ProductDNA polymerase beta subunit 
Protein accessionYP_001432514 
Protein GI156742385 
COG category[R] General function prediction only 
COG ID[COG1669] Predicted nucleotidyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.606985 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCTCC AGATCGACAT TCCGCACGAT GCAATCGCCG CCTTCTGCAA GCGCTGGCGG 
ATCAAGGAAC TGTCGATCTT CGGCTCGGCG CTGCGGGACG ACTTCCGCCC CGACAGCGAT
GTGGATGTGC TGGTGGTATT TGATGAGTCG GCGTCATGGA GCCTGTTCGA CTTGGTGCAT
GCGCAACAAG AACTTGAGCG CATATTTGAA CGACCGGTCG ATCTGGTTGA GAAAAAAGCT
GTTCGCAATC CCTTCCGCCG GCATCACATC CTTCACAATC GCGAGGTTAT TTATGCAACC
GGAAGAGCGT GA
 
Protein sequence
MPLQIDIPHD AIAAFCKRWR IKELSIFGSA LRDDFRPDSD VDVLVVFDES ASWSLFDLVH 
AQQELERIFE RPVDLVEKKA VRNPFRRHHI LHNREVIYAT GRA