Gene Rcas_2392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2392 
Symbol 
ID5539873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3081040 
End bp3082833 
Gene Length1794 bp 
Protein Length597 aa 
Translation table11 
GC content63% 
IMG OID640894524 
Productprotein serine/threonine phosphatase 
Protein accessionYP_001432492 
Protein GI156742363 
COG category[T] Signal transduction mechanisms 
COG ID[COG0631] Serine/threonine protein phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.685774 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCGTG TTTGCCAGTC GTGCGGCGCA CTCAACCGTG ACAATGCCCG CTATTGTCTC 
CGCTGCGCAC AACCGCTCGC CGTCGAACGC TCGTCGACCG ACGATACCGA CTGGCTGGCA
GCGCAATTGC TCGGTGTTTC CCCAGACCCT CCATCGGATG TCTCAGCCGC CTCCGAACAA
TCTGCGCCGC CCCGTGAGAT GCTGGCGGTC TTTCCATCGG TTGCCGCGCC GCTCATGAGG
CTGGATAAGG AGTCTGCCAT GGACGCCCCG CCTGCTGTGC CAGGAACGTC GTCACTGTTT
GCCGGTCGTT ATGAAATCGT TGCCGTATCC GACACGATGG TCGAAGCGCT TGACCGCCAG
CCATGGCGGC GTTGCTGGTC GTGTGGAACG ACCGTCAATG AGCCGGGTGA AGCATTCTGC
ACCCAGTGCG GTGCGGCGCT CGACGGTCGT CGCTACCGTG GGCAGATCAC AACCGGAGCG
CCGACCGGTC TGGCGCTGGT GGCACAGATC ACCGACCCCG CCACGCTCGC CTTCCTGCCG
CCAATCTGGG ATCAGGTGAG CGATGGCGAT CGGACGTTGA CGCTCATTCC GGCGACGCCG
CAGACGTCGC TCACCCTTCC GCTCAGTGAG ATCGAAGCAT TCGTTATTGG GCGCGATCTG
GCGCGCCTGA TGACGTTGCT GCACGATCAG GGTTTCGTGC TGGGCGCTAT CGAACCGGAC
GATCTGGAGA TTGCGCCAAC CCACGCAACG CGCCTGCGGA ATGCGCGTGG TCTGCGCCGC
GCCGAAGGAG AACCCGCCAC GACCGATCTG CTCCATCTGG CGACGCTGCT CGAAGCGCTG
ACGGCGACGC CGCGCACCAC CCGACGGCTC GATGAGGAAG AGATAACCCT GAATGCCGCA
CCGACCATCG CCGATATACT GCGTGAGATA CGTACTGGTC GCCTGACCGA TCCCGCTGAA
CTGGCACAAC GGCTCGATCT TATCATTGCG TACCACACAG CGCCGAGTCC GCTGCGAGTC
CGGTTCGGCG CCGCCACCGA TACCGGACGG GTGCGCGACC TGAACGAAGA CAGTCTGCTG
GCGCTCGATC TGCGCCTGAT CCGTCACAAC CAACCGCGTT CGTGGAGCCT GTTCATCGTC
GCCGATGGGA TGGGAGGGCA CAGTGCAGGA GAGGTGGCGT CGGACCTGGC ATTGCGCGGC
GCACTGGAGA TTGTGCAACG CGAATATCTG GCGCCAACGG TCGATGCCGA TGCACCGGAT
AAGGAGGAAA CGCTCCGTGA TGTCGTGCGG CGCGCGGTGC TCCAGGCGAA TGAGTACGTG
ATGCGCGAAG CGCGCAATCG CGGCAACGAT ATGGGTACAA CCATCACCCT GGCGCTGGTT
GCCGGTGATC GCGCGGTTAT TGGCAACGTT GGCGATAGTC GAACGTATCT GTTACGGGAA
GGAAAACTCC GGCGCGTCAG CCGTGACCAT TCGCTGGTGC AGCGGCTGGT CGATCTCGGG
CAGATCACGC CCGACGAGGT GTACACTCAC CCGCAGCGCA ATGCGGTGCT TCGTTCGCTG
GGAGACAAAT CCAATGTCGA TAGTGATATC TTTGTCGAAC GGTTGCGTCC AGGCGATGCG
CTGCTGCTGG CAAGCGACGG GTTGTGGGAA ATGGTGCGCG ACGAGCGGAT GGCGGACATT
ATTGCCGCGA ATCCCGATCC GCAGGCGGCG TGCAAAGCGC TGATCGATGC CGCCAATGCC
GCTGGCGGCG ACGATAATAT CACTGTTATT CTGGCACTCT TCGAGTCGTA CTGA
 
Protein sequence
MPRVCQSCGA LNRDNARYCL RCAQPLAVER SSTDDTDWLA AQLLGVSPDP PSDVSAASEQ 
SAPPREMLAV FPSVAAPLMR LDKESAMDAP PAVPGTSSLF AGRYEIVAVS DTMVEALDRQ
PWRRCWSCGT TVNEPGEAFC TQCGAALDGR RYRGQITTGA PTGLALVAQI TDPATLAFLP
PIWDQVSDGD RTLTLIPATP QTSLTLPLSE IEAFVIGRDL ARLMTLLHDQ GFVLGAIEPD
DLEIAPTHAT RLRNARGLRR AEGEPATTDL LHLATLLEAL TATPRTTRRL DEEEITLNAA
PTIADILREI RTGRLTDPAE LAQRLDLIIA YHTAPSPLRV RFGAATDTGR VRDLNEDSLL
ALDLRLIRHN QPRSWSLFIV ADGMGGHSAG EVASDLALRG ALEIVQREYL APTVDADAPD
KEETLRDVVR RAVLQANEYV MREARNRGND MGTTITLALV AGDRAVIGNV GDSRTYLLRE
GKLRRVSRDH SLVQRLVDLG QITPDEVYTH PQRNAVLRSL GDKSNVDSDI FVERLRPGDA
LLLASDGLWE MVRDERMADI IAANPDPQAA CKALIDAANA AGGDDNITVI LALFESY