Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2392 |
Symbol | |
ID | 5539873 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 3081040 |
End bp | 3082833 |
Gene Length | 1794 bp |
Protein Length | 597 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640894524 |
Product | protein serine/threonine phosphatase |
Protein accession | YP_001432492 |
Protein GI | 156742363 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0631] Serine/threonine protein phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.685774 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTCGTG TTTGCCAGTC GTGCGGCGCA CTCAACCGTG ACAATGCCCG CTATTGTCTC CGCTGCGCAC AACCGCTCGC CGTCGAACGC TCGTCGACCG ACGATACCGA CTGGCTGGCA GCGCAATTGC TCGGTGTTTC CCCAGACCCT CCATCGGATG TCTCAGCCGC CTCCGAACAA TCTGCGCCGC CCCGTGAGAT GCTGGCGGTC TTTCCATCGG TTGCCGCGCC GCTCATGAGG CTGGATAAGG AGTCTGCCAT GGACGCCCCG CCTGCTGTGC CAGGAACGTC GTCACTGTTT GCCGGTCGTT ATGAAATCGT TGCCGTATCC GACACGATGG TCGAAGCGCT TGACCGCCAG CCATGGCGGC GTTGCTGGTC GTGTGGAACG ACCGTCAATG AGCCGGGTGA AGCATTCTGC ACCCAGTGCG GTGCGGCGCT CGACGGTCGT CGCTACCGTG GGCAGATCAC AACCGGAGCG CCGACCGGTC TGGCGCTGGT GGCACAGATC ACCGACCCCG CCACGCTCGC CTTCCTGCCG CCAATCTGGG ATCAGGTGAG CGATGGCGAT CGGACGTTGA CGCTCATTCC GGCGACGCCG CAGACGTCGC TCACCCTTCC GCTCAGTGAG ATCGAAGCAT TCGTTATTGG GCGCGATCTG GCGCGCCTGA TGACGTTGCT GCACGATCAG GGTTTCGTGC TGGGCGCTAT CGAACCGGAC GATCTGGAGA TTGCGCCAAC CCACGCAACG CGCCTGCGGA ATGCGCGTGG TCTGCGCCGC GCCGAAGGAG AACCCGCCAC GACCGATCTG CTCCATCTGG CGACGCTGCT CGAAGCGCTG ACGGCGACGC CGCGCACCAC CCGACGGCTC GATGAGGAAG AGATAACCCT GAATGCCGCA CCGACCATCG CCGATATACT GCGTGAGATA CGTACTGGTC GCCTGACCGA TCCCGCTGAA CTGGCACAAC GGCTCGATCT TATCATTGCG TACCACACAG CGCCGAGTCC GCTGCGAGTC CGGTTCGGCG CCGCCACCGA TACCGGACGG GTGCGCGACC TGAACGAAGA CAGTCTGCTG GCGCTCGATC TGCGCCTGAT CCGTCACAAC CAACCGCGTT CGTGGAGCCT GTTCATCGTC GCCGATGGGA TGGGAGGGCA CAGTGCAGGA GAGGTGGCGT CGGACCTGGC ATTGCGCGGC GCACTGGAGA TTGTGCAACG CGAATATCTG GCGCCAACGG TCGATGCCGA TGCACCGGAT AAGGAGGAAA CGCTCCGTGA TGTCGTGCGG CGCGCGGTGC TCCAGGCGAA TGAGTACGTG ATGCGCGAAG CGCGCAATCG CGGCAACGAT ATGGGTACAA CCATCACCCT GGCGCTGGTT GCCGGTGATC GCGCGGTTAT TGGCAACGTT GGCGATAGTC GAACGTATCT GTTACGGGAA GGAAAACTCC GGCGCGTCAG CCGTGACCAT TCGCTGGTGC AGCGGCTGGT CGATCTCGGG CAGATCACGC CCGACGAGGT GTACACTCAC CCGCAGCGCA ATGCGGTGCT TCGTTCGCTG GGAGACAAAT CCAATGTCGA TAGTGATATC TTTGTCGAAC GGTTGCGTCC AGGCGATGCG CTGCTGCTGG CAAGCGACGG GTTGTGGGAA ATGGTGCGCG ACGAGCGGAT GGCGGACATT ATTGCCGCGA ATCCCGATCC GCAGGCGGCG TGCAAAGCGC TGATCGATGC CGCCAATGCC GCTGGCGGCG ACGATAATAT CACTGTTATT CTGGCACTCT TCGAGTCGTA CTGA
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Protein sequence | MPRVCQSCGA LNRDNARYCL RCAQPLAVER SSTDDTDWLA AQLLGVSPDP PSDVSAASEQ SAPPREMLAV FPSVAAPLMR LDKESAMDAP PAVPGTSSLF AGRYEIVAVS DTMVEALDRQ PWRRCWSCGT TVNEPGEAFC TQCGAALDGR RYRGQITTGA PTGLALVAQI TDPATLAFLP PIWDQVSDGD RTLTLIPATP QTSLTLPLSE IEAFVIGRDL ARLMTLLHDQ GFVLGAIEPD DLEIAPTHAT RLRNARGLRR AEGEPATTDL LHLATLLEAL TATPRTTRRL DEEEITLNAA PTIADILREI RTGRLTDPAE LAQRLDLIIA YHTAPSPLRV RFGAATDTGR VRDLNEDSLL ALDLRLIRHN QPRSWSLFIV ADGMGGHSAG EVASDLALRG ALEIVQREYL APTVDADAPD KEETLRDVVR RAVLQANEYV MREARNRGND MGTTITLALV AGDRAVIGNV GDSRTYLLRE GKLRRVSRDH SLVQRLVDLG QITPDEVYTH PQRNAVLRSL GDKSNVDSDI FVERLRPGDA LLLASDGLWE MVRDERMADI IAANPDPQAA CKALIDAANA AGGDDNITVI LALFESY
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