| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2335 |
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| Symbol | |
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| ID | 5539816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3012659 |
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| End bp | 3013765 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640894468 |
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| Product | NAD/NADP octopine/nopaline dehydrogenase |
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| Protein accession | YP_001432436 |
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| Protein GI | 156742307 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0240] Glycerol-3-phosphate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.713679 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATCCT CAACCCGCTA CACCGTCATT GGCGCCGGGA ATGGCGGGAA GGCGATGGCA
GCGCACCTGG CTCTGATGGG CTTTGAGACG ACGCTCTACA ATCGCACTCC CGAACATATC
GAAGCCATCC GGCAGCGGCG TGGCATCGAA CTGGACTCGG GCGAAACCGG TCCACGTGGT
TTTGGTCAGC TGGCGCTGGT CACGTCGGAT ATGAAAGAGG CGCTCGACCG TTGCGATGTG
GCGATGGTCG TTGTGCCTTC ATCTGCGCAC GCGGAAGTGG CGCGCGCGAT GGCGCCGTAC
CTGCGCGATG GACAGATCAT TCTTCTTCAC CCCGGTCGTA CCTGTGGCGC CATTGAGGTT
GCTAAAGTGC TGCGCGACGA ACGTTGTCGG GCGGATGTCA CCGTTGCCGA AGCCGAGACG
TTTATCTACG CCAGCCGCTC GGACGGACCG GCGCAGGCGC GTATTTTTCG CATCAAGGAA
GCGGTTCCAC TGGCGGCGCT GCCAGCATAC CGCACCGGCG ATGTGCTCGG CGTGATCCGC
GATGCGTTTC CGCAGTACAT CGATGGCGGC AACGTGCTGC GCACCGGTCT GAACAACATG
GGGGCGATTT TCCATCCGGC ACTGACCCTG CTCAACGCCG GGCGCATTGA GTCGACCCGC
GGTGACTTTC AGTTCTACAT CGACGGTGTA ACTCCCTCGG TGGCGCGCGT GCTCGAAGTG
ATCGACCGTG AGCGCGTCAC TGTTGCCGCC GCGCTCGGCA TTCGCGCCCG CACCGCACAG
GAGTGGCTGG CGCTGGCGTA CAATGCCACC GGCGACTCGC TCTATGAAGC CATTCAAAAT
CAACCGGGAT ACTATGGCAT TAAGGCGCCG CCGACTCTCA ACCACCGGTA TATCTTCGAG
GATGTGCCGA TGAGTCTGGT GCCGATTGCT GCTCTTGGTC AGCGGTATGG CGTCGCGGTT
GCCGGGATCG ACAGTATCAT CCGGTTGGCG TGCATCATTC ACCGCACCGA CTACTGGCGT
CGCGGACGCA CCCTCGATAG GCTTGGCATT GCCAATCTCA GCGTCAGCGA ATTGACGCGC
TATGTTGAAG AGGGAACGCT GGAGTAG
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| Protein sequence | MTSSTRYTVI GAGNGGKAMA AHLALMGFET TLYNRTPEHI EAIRQRRGIE LDSGETGPRG
FGQLALVTSD MKEALDRCDV AMVVVPSSAH AEVARAMAPY LRDGQIILLH PGRTCGAIEV
AKVLRDERCR ADVTVAEAET FIYASRSDGP AQARIFRIKE AVPLAALPAY RTGDVLGVIR
DAFPQYIDGG NVLRTGLNNM GAIFHPALTL LNAGRIESTR GDFQFYIDGV TPSVARVLEV
IDRERVTVAA ALGIRARTAQ EWLALAYNAT GDSLYEAIQN QPGYYGIKAP PTLNHRYIFE
DVPMSLVPIA ALGQRYGVAV AGIDSIIRLA CIIHRTDYWR RGRTLDRLGI ANLSVSELTR
YVEEGTLE
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